Add flatmap_diagnostic.py tool for validating source and generated maps #583

	name: mapmaker
	on:
	push:
	pull_request:
	workflow_dispatch:

	jobs:
	create-env:
	name: ${{ matrix.os }}
	runs-on: ${{ matrix.os }}-latest
	defaults:
	run:
	shell: bash -l {0}

	strategy:
	fail-fast: false
	matrix:
	os: [ubuntu]

	steps:
	- name: Checkout
	uses: actions/checkout@v4

	- name: Install Ubuntu packages
	uses: ConorMacBride/install-package@v1
	with:
	apt: libfontconfig1 libegl1 libglx-mesa0 libgl1-mesa-dri

	- name: Install uv
	uses: astral-sh/setup-uv@v6
	with:
	activate-environment: true

	- name: Install dependencies
	run: uv sync

	# - name: Run Pyright
	# uses: jakebailey/pyright-action@v2

	- name: Run mapmaker
	run: \|
	python runmaker.py \
	--output ./flatmaps \
	--source https://github.com/AnatomicMaps/rat-flatmap.git \
	--commit curation \
	--manifest manifest.json \
	--force \
	--no-path-layout \
	--background-tiles
	env:
	SCICRUNCH_API_KEY: ${{ secrets.SCICRUNCH_API_KEY }}

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