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lines changed Original file line number Diff line number Diff line change @@ -132,17 +132,19 @@ Download data
132132# fetch preprocessed PDBBind and Binding MOAD (as well as the optional DockGen and vdM datasets)
133133cd data/
134134
135- wget https://zenodo.org/record/6408497/files/PDBBind.zip
135+ wget " https://mailmissouri-my.sharepoint.com/:u:/g/personal/acmwhb_umsystem_edu/EXesf4oh6ztOusGqFcDyqP0Bvk-LdJ1DagEl8GNK-HxDtg?download=1 "
136136wget https://zenodo.org/records/10656052/files/BindingMOAD_2020_processed.tar
137137wget https://zenodo.org/records/10656052/files/DockGen.tar
138138wget https://files.ipd.uw.edu/pub/training_sets/pdb_2021aug02.tar.gz
139139
140- unzip PDBBind.zip
140+ mv EXesf4oh6ztOusGqFcDyqP0Bvk-LdJ1DagEl8GNK-HxDtg? download=1 PDBBind.tar.gz
141+
142+ tar -xzf PDBBind.tar.gz
141143tar -xf BindingMOAD_2020_processed.tar
142144tar -xf DockGen.tar
143145tar -xzf pdb_2021aug02.tar.gz
144146
145- rm PDBBind.zip BindingMOAD_2020_processed.tar DockGen.tar pdb_2021aug02.tar.gz
147+ rm PDBBind.tar.gz BindingMOAD_2020_processed.tar DockGen.tar pdb_2021aug02.tar.gz
146148
147149mkdir pdbbind/ moad/ pdbsidechain/
148150mv PDBBind_processed/ pdbbind/
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