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Automate run of MedCAT service. Add integration test. Improve build performance #203

	name: Run tests

	on:

	push:
	branches: [ devel, master ]
	pull_request:
	branches: [ devel, master ]

	release:
	types: [published]

	# Allows you to run this workflow manually from the Actions tab
	workflow_dispatch:

	jobs:

	build:

	runs-on: ubuntu-latest

	env:
	working-directory: ./

	# Steps represent a sequence of tasks that will be executed as part of the job
	steps:
	- name: checkout repo
	uses: actions/checkout@v2

	- name: Cache MedMen Model
	id: cache-medmen
	uses: actions/cache@v4
	with:
	path: models/medmen
	key: medmen-${{ hashFiles('scripts/download_medmen.sh') }}

	- name: Install Python 3
	uses: actions/setup-python@v5
	with:
	python-version: 3.9
	cache: 'pip' # caching pip dependencies

	- name: Install dependencies
	run: \|
	sudo apt-get install -y isort flake8
	python -m pip install --upgrade pip
	python -m pip install virtualenv setuptools
	python -m pip install isort flake8 mypy stubs types-Flask types-simplejson types-setuptools types-requests
	python -m pip install -r ./requirements.txt --extra-index-url https://download.pytorch.org/whl/cpu/;

	- name: Check linting and types
	run: \|
	isort .
	flake8 .
	mypy . --ignore-missing-imports

	- name: Run tests
	run: bash run_tests.sh

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