Running on M1 fails.
Command exit status:
139
Command output:
usearch v11.0.667_i86linux32, 4.0Gb RAM (8.0Gb total), 12 cores
WARNING: Empty prediction in line 1
qemu: uncaught target signal 11 (Segmentation fault) - core dumped
.command.sh: line 3: 74 Segmentation fault usearch -sintax_summary 100.tsv -output "100_domain_summary.txt" -rank d
Checked online and found a few threads which we tried,
nextflow-io/rnaseq-nf#7
but it still fails with segmentation fault. usearch is 32 bit and also fails using gitpod, so you can just skip this module with the flag --gitpod... Not a fix but means the pipeline does not fail.
Running on M1 fails.
Checked online and found a few threads which we tried,
nextflow-io/rnaseq-nf#7
but it still fails with segmentation fault. usearch is 32 bit and also fails using gitpod, so you can just skip this module with the flag
--gitpod... Not a fix but means the pipeline does not fail.