Skip to content

Could you please briefly explain the magamap Hi-C file? #93

@YiweiNiu

Description

@YiweiNiu

Hi, thank you for this useful method! For the Hi-C file, could you please briefly the megamap Hi-C is? I suppose it's not the same as the average Hi-C used by ABC model?

We have not trained powerlaw models. If you don't have cell specific hic, opt to use megamap hic instead: https://s3.us-central-1.wasabisys.com/aiden-encode-hic-mirror/bifocals_iter2/tissues.hic. Megamap is a culmination of hic across many different tissues.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions