From c124b70bf5d7b42b422fd355f4e4134e6b21d0f9 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Sun, 21 Mar 2021 10:03:08 +0100 Subject: [PATCH] use https for all links to avoid warnings about mixed contents --- SequenceAlignment/index.html | 340 ++++++++++++++++------------------- 1 file changed, 150 insertions(+), 190 deletions(-) diff --git a/SequenceAlignment/index.html b/SequenceAlignment/index.html index 7157aac..cb22b16 100644 --- a/SequenceAlignment/index.html +++ b/SequenceAlignment/index.html @@ -1,199 +1,159 @@ + - - Sequence Alignment Game - - - - - - - - - - - + + Sequence Alignment Game + + + + + + + + + + + - -
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Sequence Alignment Game

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HOW TO PLAY

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  • Try to get as many matches and as few mismatches and gaps as possible
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  • Drag a nucleotide to the right to add a gap.
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  • Drag to the left to remove a gap.
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  • A gap appearing in both sequences at the same location will be automatically removed.
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- Level 1. Length: 10, Probability of mutation: 20%, Maximum # of deletions: 2
- Level 2. Length: 12, Probability of mutation: 30%, Maximum # of deletions: 3
- Level 3. Length: 15, Probability of mutation: 40%, Maximum # of deletions: 4
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If you wish, you can change the default Match, Mismatch, and Gap scores in the below textboxes.

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#ACGT
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Match Score
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Mismatch Score
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Gap Score
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Your cumulative score

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- - -Created by Minji Kim, Yeonsung Kim, Lei Qian, and Jun S. Song. - - - -
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+ Go back to Game Selection +
+
+
+ +

Sequence Alignment Game

+
+
+
+
+
+
+
+ +

HOW TO PLAY

+
    +
  • Try to get as many matches and as few mismatches and gaps as possible
    • +
  • Drag a nucleotide to the right to add a gap.
    • +
  • Drag to the left to remove a gap.
    • +
  • A gap appearing in both sequences at the same location will be automatically removed. +
    • +
+ +
+
+
+
+ Level 1. Length: 10, Probability of mutation: 20%, Maximum # of deletions: 2
+ Level 2. Length: 12, Probability of mutation: 30%, Maximum # of deletions: 3
+ Level 3. Length: 15, Probability of mutation: 40%, Maximum # of deletions: 4
+
+
+
+
+
+ + + + + + + + +
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+
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+ +
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If you wish, you can change the default Match, Mismatch + , and Gap scores in the below textboxes.

+
+
+
+ + + + + + + + + + + + + + +
#ACGT
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+
Match Score
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Mismatch Score
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Gap Score
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Your cumulative score

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+ + + Created by Minji Kim, Yeonsung Kim, Lei Qian, and Jun S. Song. + + +
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