Hello, when following current instructions pip install . fails with:
pip install .
Processing /home/diedre/micview
Preparing metadata (setup.py) ... done
Requirement already satisfied: setuptools in /home/diedre/miniconda3/envs/micview/lib/python3.8/site-packages (from MICView==1.0.0) (75.1.0)
Collecting numpy>=1.22 (from MICView==1.0.0)
Using cached numpy-1.24.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.6 kB)
Collecting pillow>=9.0.0 (from MICView==1.0.0)
Using cached pillow-10.4.0-cp38-cp38-manylinux_2_28_x86_64.whl.metadata (9.2 kB)
Collecting SimpleITK>=2.3.0 (from MICView==1.0.0)
Downloading simpleitk-2.5.0.tar.gz (2.1 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.1/2.1 MB 9.0 MB/s eta 0:00:00
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... done
Collecting screeninfo>=0.8.1 (from MICView==1.0.0)
Downloading screeninfo-0.8.1-py3-none-any.whl.metadata (2.9 kB)
Collecting pydicom (from MICView==1.0.0)
Using cached pydicom-2.4.4-py3-none-any.whl.metadata (7.8 kB)
Collecting dicom2nifti (from MICView==1.0.0)
Downloading dicom2nifti-2.6.2-py3-none-any.whl.metadata (1.5 kB)
Collecting matplotlib (from MICView==1.0.0)
Using cached matplotlib-3.7.5-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (5.7 kB)
Collecting nibabel (from dicom2nifti->MICView==1.0.0)
Using cached nibabel-5.2.1-py3-none-any.whl.metadata (8.8 kB)
Collecting scipy (from dicom2nifti->MICView==1.0.0)
Using cached scipy-1.10.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (58 kB)
INFO: pip is looking at multiple versions of dicom2nifti to determine which version is compatible with other requirements. This could take a while.
Collecting dicom2nifti (from MICView==1.0.0)
Downloading dicom2nifti-2.6.1-py3-none-any.whl.metadata (1.5 kB)
Downloading dicom2nifti-2.6.0-py3-none-any.whl.metadata (1.5 kB)
Collecting python-gdcm (from dicom2nifti->MICView==1.0.0)
Downloading python_gdcm-3.0.26.tar.gz (3.4 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.4/3.4 MB 7.2 MB/s eta 0:00:00
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing metadata (pyproject.toml) ... error
error: subprocess-exited-with-error
× Preparing metadata (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [25 lines of output]
*** scikit-build-core 0.9.10 using CMake 4.1.0 (wheel)
*** Configuring CMake...
loading initial cache file /tmp/tmpj1t6x86j/build/CMakeInit.txt
CMake Error: The source directory "/tmp/pip-install-e4o4uocp/python-gdcm_68442fd54cd7403685f099ac34bf8ddb" does not appear to contain CMakeLists.txt.
Specify --help for usage, or press the help button on the CMake GUI.
Traceback (most recent call last):
File "/home/diedre/miniconda3/envs/micview/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
main()
File "/home/diedre/miniconda3/envs/micview/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/home/diedre/miniconda3/envs/micview/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 152, in prepare_metadata_for_build_wheel
whl_basename = backend.build_wheel(metadata_directory, config_settings)
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/hatchling/build.py", line 58, in build_wheel
return os.path.basename(next(builder.build(directory=wheel_directory, versions=['standard'])))
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/hatchling/builders/plugin/interface.py", line 147, in build
build_hook.initialize(version, build_data)
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/scikit_build_core/hatch/plugin.py", line 125, in initialize
self._initialize(build_data=build_data)
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/scikit_build_core/hatch/plugin.py", line 226, in _initialize
builder.configure(
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/scikit_build_core/builder/builder.py", line 237, in configure
self.config.configure(
File "/tmp/pip-build-env-triqxc72/overlay/lib/python3.8/site-packages/scikit_build_core/cmake.py", line 221, in configure
raise FailedLiveProcessError(msg) from None
scikit_build_core.errors.FailedLiveProcessError: CMake configuration failed
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
Hello, when following current instructions pip install . fails with: