diff --git a/.codeocean/app-panel.json b/.codeocean/app-panel.json index 4a23d20..c5e7368 100644 --- a/.codeocean/app-panel.json +++ b/.codeocean/app-panel.json @@ -14,7 +14,7 @@ "categories": [ { "id": "gDLmTU36PrmD13RK", - "name": "Input Data Parameters", + "name": "Basic", "description": "Options for defining input data", "icon": "📁" } diff --git a/CHANGELOG.md b/CHANGELOG.md index eba0f6b..4fb76db 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,9 @@ # CodeOcean Capsule - MOSuite - create multiOmicDataset +## Development version + +- Improved the Code Ocean parameter UI for the create capsule (#11, @phoman14). + ## v7.0 - Throw a warning if multiple counts files or metadata files are found matching the patterns. (#6, @kelly-sovacool) @@ -39,4 +43,4 @@ This release is identical to v1.0, except it is a Standard app rather than a No- First release of MOSuite-create as a No-Code app. - (`a332cc8`) \ No newline at end of file + (`a332cc8`) diff --git a/code/main.R b/code/main.R index 9ce2ad5..c99b0fe 100644 --- a/code/main.R +++ b/code/main.R @@ -32,8 +32,8 @@ parser$add_argument( args <- parser$parse_args() # find input files -regex_count = args$regex_count -regex_sample = args$regex_sample +regex_count <- args$regex_count +regex_sample <- args$regex_sample data_dir <- "../data" data_files <- list.files( file.path(data_dir),