From 1487dc0f23bfbc38d30d6b809f59b1b685f1260d Mon Sep 17 00:00:00 2001 From: phoman14 Date: Tue, 30 Jun 2026 04:08:20 -0400 Subject: [PATCH 1/4] Rename create panel category to Basic --- .codeocean/app-panel.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.codeocean/app-panel.json b/.codeocean/app-panel.json index 4a23d20..c5e7368 100644 --- a/.codeocean/app-panel.json +++ b/.codeocean/app-panel.json @@ -14,7 +14,7 @@ "categories": [ { "id": "gDLmTU36PrmD13RK", - "name": "Input Data Parameters", + "name": "Basic", "description": "Options for defining input data", "icon": "📁" } From a1e46c1bd618235f19ce8d12ee6378d565abbb35 Mon Sep 17 00:00:00 2001 From: phoman14 Date: Tue, 30 Jun 2026 13:40:23 -0400 Subject: [PATCH 2/4] Update changelog for parameter UI changes --- CHANGELOG.md | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index eba0f6b..ac4c729 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,9 @@ # CodeOcean Capsule - MOSuite - create multiOmicDataset +## Development version + +- Improved the Code Ocean parameter UI for the create capsule (#11). + ## v7.0 - Throw a warning if multiple counts files or metadata files are found matching the patterns. (#6, @kelly-sovacool) @@ -39,4 +43,4 @@ This release is identical to v1.0, except it is a Standard app rather than a No- First release of MOSuite-create as a No-Code app. - (`a332cc8`) \ No newline at end of file + (`a332cc8`) From bcaccdeffb8625c9f87c88ff508c1b28b068615e Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Tue, 30 Jun 2026 17:40:37 +0000 Subject: [PATCH 3/4] `air format` (GitHub Actions) --- code/main.R | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/code/main.R b/code/main.R index 9ce2ad5..c99b0fe 100644 --- a/code/main.R +++ b/code/main.R @@ -32,8 +32,8 @@ parser$add_argument( args <- parser$parse_args() # find input files -regex_count = args$regex_count -regex_sample = args$regex_sample +regex_count <- args$regex_count +regex_sample <- args$regex_sample data_dir <- "../data" data_files <- list.files( file.path(data_dir), From 181f44924a65f9749fac94201010596381606c64 Mon Sep 17 00:00:00 2001 From: phoman14 Date: Tue, 30 Jun 2026 14:10:56 -0400 Subject: [PATCH 4/4] Add author handle to changelog entry --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index ac4c729..4fb76db 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -2,7 +2,7 @@ ## Development version -- Improved the Code Ocean parameter UI for the create capsule (#11). +- Improved the Code Ocean parameter UI for the create capsule (#11, @phoman14). ## v7.0