fix: correct gecko path

Author: IVANDOMENZAIN

ComplementaryScripts/enhanceGEM_cellLine.m

@@ -1,4 +1,4 @@
-function [ecModel,ecModel_batch] = enhanceGEM_cellLine(cellName,GECKO_path)
+function [ecModel,ecModel_batch] = enhanceGEM_cellLine(cellName)
 %enhanceGEM_cellLine
 % 
 % Function that loads a cell-line or tissue specific human metabolism model
@@ -40,8 +40,9 @@
 mkdir(newDir)
 save([newDir '/enzData.mat'],'model_data','kcats');
 %GEt ecModel matlab structure
+cd ../../..
 model_data = removeFields(model_data);
-cd ../change_model
+cd GECKO/geckomat/change_model
 ecModel = readKcatData(model_data,kcats);
 % Save output models:
 save(['../../../../models/' cellName '/ecModel.mat'],'ecModel')

ComplementaryScripts/generate_human_ecModels_NCI60.m

@@ -35,7 +35,7 @@
     mkdir Data
     cd (current)
     %Models mat files are saved in their respective folder by enhanceGEM_cellLine
-    [ecModel,ecModel_batch] = enhanceGEM_cellLine(cellName,[current '/GECKO']);
+    [ecModel,ecModel_batch] = enhanceGEM_cellLine(cellName);
 end
 cd (current)
 rmdir('GECKO', 's')