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Fix pip-install workflow to prevent artifact corruption #130

Fix pip-install workflow to prevent artifact corruption

Fix pip-install workflow to prevent artifact corruption #130

Workflow file for this run

name: tests
on:
pull_request:
branches: [main]
jobs:
tests:
name: 'py${{ matrix.python-version }} on ${{ matrix.os }}'
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-22.04, ubuntu-24.04, macos-15-intel, macos-26]
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "3.14"]
steps:
- uses: actions/checkout@v5
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: 'pip'
- name: Install VPLanet
run: |
python -m pip install --upgrade pip
python -m pip install vplanet
- name: Install vspace
run: |
python -m pip install -e .
- name: Install test dependencies
run: |
python -m pip install pytest pytest-cov pytest-timeout
- name: Run diagnostic test
timeout-minutes: 3
run: |
# First run a simple unit test to verify pytest works
echo "Running single unit test as diagnostic..."
python -m pytest tests/Vspace_Explicit/test_vspace_explicit.py -v -s
- name: Enable subprocess coverage
run: |
# Install coverage subprocess support
echo "import coverage; coverage.process_startup()" > $(python -c "import site; print(site.getsitepackages()[0])")/coverage_subprocess.pth
# Set environment variable for coverage configuration
echo "COVERAGE_PROCESS_START=${{ github.workspace }}/.coveragerc" >> $GITHUB_ENV
- name: Run tests
timeout-minutes: 20
run: |
# Run all tests with verbose output, capture disabled to see subprocess output, and per-test timeout
python -m pytest tests/ -v -s --timeout=300 --junitxml=junit/test-results-${{ matrix.os }}-${{ matrix.python-version }}.xml --cov --cov-report=xml --cov-report=term
- name: Combine coverage data
if: matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9'
run: |
# Move all coverage files from subdirectories to repository root
find tests/ -name ".coverage.*" -type f -exec mv {} . \; 2>/dev/null || true
# Combine all coverage data files
python -m coverage combine
python -m coverage xml
python -m coverage report
- name: Upload coverage to Codecov
# Only upload from one runner to avoid redundant API calls
if: matrix.os == 'ubuntu-22.04' && matrix.python-version == '3.9'
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ./coverage.xml
flags: ${{ matrix.os }}-py${{ matrix.python-version }}
name: ${{ matrix.os }}-py${{ matrix.python-version }}
fail_ci_if_error: false
- name: Publish test results
uses: EnricoMi/publish-unit-test-result-action@v2
if: always() && runner.os == 'Linux'
with:
files: junit/test-*.xml
check_name: Test Results (py${{ matrix.python-version }} on ${{ matrix.os }})