diff --git a/nextflow_schema.json b/nextflow_schema.json index b100be58..3de7241c 100644 --- a/nextflow_schema.json +++ b/nextflow_schema.json @@ -729,6 +729,15 @@ "fa_icon": "far fa-file-code", "default": "COSMIC_v3.4_SBS_GRCh38.txt" }, + "indel_ref_signatures": { + "type": "string", + "format": "file-path", + "mimetype": "text/plain", + "description": "Path to file containing the reference indel (ID) signatures to use in SigProfilerAssignment.", + "help_text": "You can obtain it from COSMIC website. Note that for ID signatures the GRCh37 genome version is used.", + "fa_icon": "far fa-file-code", + "default": "COSMIC_v3.4_ID_GRCh37.txt" + }, "wgs_trinuc_counts": { "type": "string", "format": "file-path",