diff --git a/CHANGELOG.md b/CHANGELOG.md
index 223b5e2..3125d61 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,12 @@
 # Changelog
 
+## [0.6.1](https://github.com/czi-ai/transcriptformer/compare/v0.6.0...v0.6.1) (2025-11-06)
+
+
+### Bug Fixes
+
+* Updated README and formatting ([#58](https://github.com/czi-ai/transcriptformer/issues/58)) ([2c1ce05](https://github.com/czi-ai/transcriptformer/commit/2c1ce0550ad58009eac70719c249fa3ff224acd8))
+
 ## [0.6.0](https://github.com/czi-ai/transcriptformer/compare/v0.5.0...v0.6.0) (2025-08-20)
 
 
diff --git a/pyproject.toml b/pyproject.toml
index 95da510..533b13c 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -5,7 +5,7 @@ requires = [ "hatchling" ]
 
 [project]
 name = "transcriptformer"
-version = "0.6.0"
+version = "0.6.1"
 description = "A transformer model for gene expression data"
 readme = "README.md"
 license = { text = "MIT" }