Some future directions for the project from @georgiadoing
I wonder if you might also be able to figure out any general trends with respect to experimental design and how many generic genes change? Like does knocking out a transcription factor lead to more generic genes than knocking out the small RNA? Or does either genetic manipulation lead to more changes in generic genes than a media-based comparison?
This will require curating our training set to only include certain experimental designs and then comparing generic genes across these different training sets.
Some future directions for the project from @georgiadoing
I wonder if you might also be able to figure out any general trends with respect to experimental design and how many generic genes change? Like does knocking out a transcription factor lead to more generic genes than knocking out the small RNA? Or does either genetic manipulation lead to more changes in generic genes than a media-based comparison?
This will require curating our training set to only include certain experimental designs and then comparing generic genes across these different training sets.