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Hi @jaberg,
Thanks for the package! This extension on hyperopt can be very handy.
I was trying to run fmin with algo=ei.suggest and got the error message above. The full error message is as follows:
AttributeError Traceback (most recent call last)
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest_ei.py in init_fns(self)
18 try:
---> 19 self._cost_deriv
20 except AttributeError:
AttributeError: 'DomainGP_EI' object has no attribute '_cost_deriv'
During handling of the above exception, another exception occurred:
TypeError Traceback (most recent call last)
<ipython-input-146-b79d81f8328e> in <module>()
5 #algo=ucb.suggest,
6 max_evals = 30,
----> 7 trials=trials)
8 rf_best
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hyperopt/fmin.py in fmin(fn, space, algo, max_evals, trials, rstate, allow_trials_fmin, pass_expr_memo_ctrl, catch_eval_exceptions, verbose, return_argmin)
305 verbose=verbose,
306 catch_eval_exceptions=catch_eval_exceptions,
--> 307 return_argmin=return_argmin,
308 )
309
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hyperopt/base.py in fmin(self, fn, space, algo, max_evals, rstate, verbose, pass_expr_memo_ctrl, catch_eval_exceptions, return_argmin)
633 pass_expr_memo_ctrl=pass_expr_memo_ctrl,
634 catch_eval_exceptions=catch_eval_exceptions,
--> 635 return_argmin=return_argmin)
636
637
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hyperopt/fmin.py in fmin(fn, space, algo, max_evals, trials, rstate, allow_trials_fmin, pass_expr_memo_ctrl, catch_eval_exceptions, verbose, return_argmin)
318 verbose=verbose)
319 rval.catch_eval_exceptions = catch_eval_exceptions
--> 320 rval.exhaust()
321 if return_argmin:
322 return trials.argmin
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hyperopt/fmin.py in exhaust(self)
197 def exhaust(self):
198 n_done = len(self.trials)
--> 199 self.run(self.max_evals - n_done, block_until_done=self.async)
200 self.trials.refresh()
201 return self
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hyperopt/fmin.py in run(self, N, block_until_done)
155 d['result'].get('status')))
156 new_trials = algo(new_ids, self.domain, trials,
--> 157 self.rstate.randint(2 ** 31 - 1))
158 assert len(new_ids) >= len(new_trials)
159 if len(new_trials):
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest_ei.py in suggest(new_ids, domain, trials, seed, warmup_cutoff, n_buckshots, n_finetunes, stop_at, plot_contours, gp_fit_method, failure_loss, max_ei_thresh)
200 n_buckshots=n_buckshots,
201 n_finetunes=n_finetunes,
--> 202 rng=rng,
203 )
204 t1 = time.time()
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest_ei.py in optimize_over_X(self, n_buckshots, n_finetunes, rng)
137 n_finetunes,
138 rng,
--> 139 ret_raw=True)
140 if len(self.gpr._params_list) == 1:
141 Ks = self._K_new(np.atleast_2d(rval_raw),
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest.py in optimize_over_X(self, n_buckshots, n_finetunes, rng, ret_raw, ret_results)
360 # -- sample a bunch of points
361 buckshot = self.draw_n_feature_vecs(n_buckshots, rng)
--> 362 buckshot_crit = self.crit(buckshot)
363 best_first = np.argsort(buckshot_crit)
364 #print 'buckshot stats', buckshot_crit.min(), buckshot_crit.max()
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest_ei.py in crit(self, X)
95
96 def crit(self, X):
---> 97 self.init_fns()
98 #return -self.gpr.logEI(X,
99 #self._EI_thresh,
~/anaconda/envs/ldsa/lib/python3.6/site-packages/hp_gpsmbo/hpsuggest_ei.py in init_fns(self)
53 on_unused_input='ignore',
54 allow_input_downcast=True,
---> 55 profile=0)
56 op_Kcond.use_lazy_cholesky = None
57 op_Kcond.use_lazy_cholesky_idx = None
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/compile/function.py in function(inputs, outputs, mode, updates, givens, no_default_updates, accept_inplace, name, rebuild_strict, allow_input_downcast, profile, on_unused_input)
315 on_unused_input=on_unused_input,
316 profile=profile,
--> 317 output_keys=output_keys)
318 return fn
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/compile/pfunc.py in pfunc(params, outputs, mode, updates, givens, no_default_updates, accept_inplace, name, rebuild_strict, allow_input_downcast, profile, on_unused_input, output_keys)
484 accept_inplace=accept_inplace, name=name,
485 profile=profile, on_unused_input=on_unused_input,
--> 486 output_keys=output_keys)
487
488
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/compile/function_module.py in orig_function(inputs, outputs, mode, accept_inplace, name, profile, on_unused_input, output_keys)
1839 name=name)
1840 with theano.change_flags(compute_test_value="off"):
-> 1841 fn = m.create(defaults)
1842 finally:
1843 t2 = time.time()
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/compile/function_module.py in create(self, input_storage, trustme, storage_map)
1713 theano.config.traceback.limit = theano.config.traceback.compile_limit
1714 _fn, _i, _o = self.linker.make_thunk(
-> 1715 input_storage=input_storage_lists, storage_map=storage_map)
1716 finally:
1717 theano.config.traceback.limit = limit_orig
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/gof/link.py in make_thunk(self, input_storage, output_storage, storage_map)
697 return self.make_all(input_storage=input_storage,
698 output_storage=output_storage,
--> 699 storage_map=storage_map)[:3]
700
701 def make_all(self, input_storage, output_storage):
~/anaconda/envs/ldsa/lib/python3.6/site-packages/theano/gof/vm.py in make_all(self, profiler, input_storage, output_storage, storage_map)
1089 compute_map,
1090 [],
-> 1091 impl=impl))
1092 linker_make_thunk_time[node] = time.time() - thunk_start
1093 if not hasattr(thunks[-1], 'lazy'):
TypeError: ('The following error happened while compiling the node', <hp_gpsmbo.op_Kcond.LazyCholesky object at 0x1364166d8>(Elemwise{Composite{((i0 * exp((((-maximum(((i1 + i2) - i3), i4)) / i5) + (i6 * maximum(((i7 + i8) - i9), i4)) + log(i10)))) + (i11 * i12))}}[(0, 3)].0, reuse_cholesky, reuse_cholesky_idx), '\n', "make_thunk() got an unexpected keyword argument 'impl'")
Any suggestions on what could be going wrong?
Much appreciated!
Miguel
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