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djpbarryAlicjaSkorkowskastemarcottictrueden
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Create tutorial on batch processing via ImageJ Macro Language in FIJI (#387)
This adds a detailed tutorial page to get people started on batch processing via macros in Fiji/ImageJ. It is largely based on material used in training workshops at the Francis Crick Institute. Co-authored-by: AlicjaSkorkowska <alicja.skorkowska@crick.ac.uk> Co-authored-by: Stefania Marcotti <33655510+stemarcotti@users.noreply.github.com> Co-authored-by: Curtis Rueden <ctrueden@wisc.edu>
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_pages/scripting/batch.md

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mediawiki: Batch_Processing
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title: Batch Processing
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section: Extend:Scripting:Languages
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---
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{% include notice glyph="&#127891;" content="See also the [step-by-step tutorial on building a macro](/tutorials/batch-processing-with-ij-macro) to automate [batch processing](batch)." %}
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# Overview
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A fundamental benefit to creating [scripts and macros](/scripting) in [ImageJ](/software/imagej) is the ability to *reuse* their functionality *on more than one image*. Although this can be done manually, there are multiple ways to easily automate this batch processing.

_pages/scripting/index.md

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mediawiki: Scripting
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title: Scripting
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section: Extend:Scripting
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project: /software/imagej2
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ImageJ2 allows you to write scripts in several different languages.
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[ImageJ](/software/imagej) and [ImageJ2](/software/imagej2) allow you to write scripts in several different languages.
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# Getting started
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_pages/scripting/macro.md

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{% include notice glyph="&#127891;" content="See also the [step-by-step tutorial on building a macro](/tutorials/batch-processing-with-ij-macro) to automate [batch processing](batch)." %}
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# Why Macros?
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Macros can be used to

_pages/tutorials/batch-processing-with-ij-macro.md

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