We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
1 parent fe83d08 commit e3e9fa3Copy full SHA for e3e9fa3
1 file changed
src/main/groovy/nfcmgg/plugin/CmggExtension.groovy
@@ -31,20 +31,23 @@ class CmggExtension extends PluginExtensionPoint {
31
/*
32
* Parse first line of a FASTQ file, return the flowcell id and lane number.
33
*/
34
+ @Function
35
String flowcellLaneFromFastq(Path path) {
36
return nfcmgg.plugin.utils.FastqUtils.flowcellLaneFromFastq(path)
37
}
38
39
40
* Get first line of a FASTQ file
41
42
43
String readFirstLineOfFastq(Path path) {
44
return nfcmgg.plugin.utils.FastqUtils.readFirstLineOfFastq(path)
45
46
47
48
* Add readgroup to meta and remove lane
49
50
51
List addReadgroupToMeta(Map meta, List<Path> files, Map params) {
52
return nfcmgg.plugin.utils.FastqUtils.addReadgroupToMeta(meta, files, params)
53
0 commit comments