diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index e315a35..8e6ce04 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -44,3 +44,5 @@ custom_plot_config: defaultsort: - column: "Best match LOD" direction: asc + +template: "cmgg" \ No newline at end of file diff --git a/conf/modules.config b/conf/modules.config index 98dd94d..47230ad 100644 --- a/conf/modules.config +++ b/conf/modules.config @@ -63,6 +63,7 @@ process { } withName: 'MULTIQC_MAIN' { + container = 'quay.io/cmgg/multiqc_cmgg:0.0.2dev' ext.args = { params.multiqc_title ? "--title \"$params.multiqc_title\"" : '' } publishDir = [ path: { "${params.outdir}/multiqc" },