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Description
Is your feature request related to a problem? Please describe.
It's not a problem, but it does seem like, once BEP038 is merged into BIDS, it would be appropriate to include custom templates stored in the TemplateFlow directory as BIDS-format templates in sourcedata/, much like the atlas-4S example in bids-standard/bids-examples#501.
Describe the solution you'd like
I think sMRIPrep could copy the relevant templates to sourcedata and organize them as a BIDS template dataset. Then SpatialReferences and such could reference that folder instead of the local TemplateFlow folder.
Describe alternatives you've considered
Keep things as-is.
Additional context