Boost version problems

[percolator]

I get errors when compiling maracluster on my ubuntu 20.04 installation. Do you understand what is wrong?

$ git clone git@github.com:statisticalbiotechnology/maracluster.git; cd maracluster; bash quickbuild.sh
[.....]

• Architecture: amd64
  -- Checking packages:
  CMake Error at /usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake:117 (find_package):
  Found package configuration file:

  /usr/lib/x86_64-linux-gnu/cmake/boost_filesystem-1.71.0/boost_filesystem-config.cmake

  but it set boost_filesystem_FOUND to FALSE so package "boost_filesystem" is
  considered to be NOT FOUND. Reason given by package:

  No suitable build variant has been found.

  The following variants have been tried and rejected:

  • libboost_filesystem.so.1.71.0 (shared, Boost_USE_STATIC_LIBS=ON)

  • libboost_filesystem.a (shared runtime, Boost_USE_STATIC_RUNTIME=ON)

Call Stack (most recent call first):
/usr/lib/x86_64-linux-gnu/cmake/Boost-1.71.0/BoostConfig.cmake:182 (boost_find_component)
/usr/share/cmake-3.16/Modules/FindBoost.cmake:443 (find_package)
src/CMakeLists.txt:22 (find_package)

-- Configuring incomplete, errors occurred!
See also "/tmp/tst/build/ubuntu64/maracluster/CMakeFiles/CMakeOutput.log".

[MatthewThe]

Not sure what the CMake errors mean, but it should be using the Boost version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ and not v1.71.0 from /usr/lib/....

Do you still have the full build log? Perhaps the ProteoWizard build failed.

[percolator]

Yes, it seems to be the install_proteowizard.sh scripts that fails to get the right download. Could proteowizard have changed their naming conventions?

…

--Lukas

On Mon, Jun 27, 2022 at 6:59 PM MatthewThe ***@***.***> wrote: Not sure what the CMake errors mean, but it should be using the Boost version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ and not v1.71.0 from /usr/lib/.... Do you still have the full build log? Perhaps the ProteoWizard build failed. — Reply to this email directly, view it on GitHub <#24 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAAXKAAD7SHQXDG3PLLNMZLVRHMVDANCNFSM5Z6O7D2A> . You are receiving this because you authored the thread.Message ID: ***@***.***>

[percolator]

I forgot to attach error logs. $ cat pwiz_installation.log /tmp/maracluster/..//maracluster/admin/builders/install_proteowizard.sh: line 30: ./quickbuild.sh: No such file or directory and the maracluster quick_build log is attached On Tue, Jun 28, 2022 at 12:51 PM Lukas Käll ***@***.***> wrote:

…

Yes, it seems to be the install_proteowizard.sh scripts that fails to get the right download. Could proteowizard have changed their naming conventions? --Lukas On Mon, Jun 27, 2022 at 6:59 PM MatthewThe ***@***.***> wrote: > Not sure what the CMake errors mean, but it should be using the Boost > version from ProteoWizard (v1.76.0) at /tmp/tst/build/ubuntu64/tools/ > and not v1.71.0 from /usr/lib/.... > > Do you still have the full build log? Perhaps the ProteoWizard build > failed. > > — > Reply to this email directly, view it on GitHub > <#24 (comment)>, > or unsubscribe > <https://github.com/notifications/unsubscribe-auth/AAAXKAAD7SHQXDG3PLLNMZLVRHMVDANCNFSM5Z6O7D2A> > . > You are receiving this because you authored the thread.Message ID: > ***@***.***> >