Oo refactoring

.vscode/settings.json

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+{
+    "files.associations": {
+        "array": "cpp",
+        "atomic": "cpp",
+        "bit": "cpp",
+        "*.tcc": "cpp",
+        "cctype": "cpp",
+        "clocale": "cpp",
+        "cmath": "cpp",
+        "cstdarg": "cpp",
+        "cstddef": "cpp",
+        "cstdint": "cpp",
+        "cstdio": "cpp",
+        "cstdlib": "cpp",
+        "cwchar": "cpp",
+        "cwctype": "cpp",
+        "deque": "cpp",
+        "unordered_map": "cpp",
+        "vector": "cpp",
+        "exception": "cpp",
+        "algorithm": "cpp",
+        "functional": "cpp",
+        "iterator": "cpp",
+        "memory": "cpp",
+        "memory_resource": "cpp",
+        "numeric": "cpp",
+        "optional": "cpp",
+        "random": "cpp",
+        "string": "cpp",
+        "string_view": "cpp",
+        "system_error": "cpp",
+        "tuple": "cpp",
+        "type_traits": "cpp",
+        "utility": "cpp",
+        "fstream": "cpp",
+        "initializer_list": "cpp",
+        "iosfwd": "cpp",
+        "istream": "cpp",
+        "limits": "cpp",
+        "new": "cpp",
+        "ostream": "cpp",
+        "sstream": "cpp",
+        "stdexcept": "cpp",
+        "streambuf": "cpp",
+        "typeinfo": "cpp",
+        "iostream": "cpp",
+        "cstring": "cpp",
+        "forward_list": "cpp",
+        "list": "cpp",
+        "map": "cpp",
+        "set": "cpp",
+        "unordered_set": "cpp",
+        "cinttypes": "cpp",
+        "typeindex": "cpp",
+        "valarray": "cpp",
+        "variant": "cpp",
+        "chrono": "cpp",
+        "condition_variable": "cpp",
+        "ctime": "cpp",
+        "ratio": "cpp",
+        "mutex": "cpp",
+        "thread": "cpp",
+        "complex": "cpp"
+    },
+    "cmake.configureOnOpen": false
+}

ReadMe.txt

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+# InFluence
+
+
+
+
+## Running from main.py
+
+You can run influence from main.py by navigating into the InFluence directory and running python3 main.py.
+You can folow the comments in the file to understand how to use the main.py file.
+
+## Directly Running CLI 
+
+You can navigate to the InFluence/interface_code and run python3 InFluenceCLI.py along with any commands listed in the CLI section below.
+
+
+
+## Running GUI directly from source code:
+
+
+You can navigate to the InFluence/interface_code and run python3 InFluenceCLI.py --gui and the gui will launch.
+
+
+
+
+## Package  Installation
+
+1. **Navigate to the InFluence Directory**: Open your terminal and navigate to the directory where you have InFluence installed. Use the `cd` command to change your working directory.
+
+   ```bash
+   cd /path/to/InFluence
+Build the Wheel Distribution: To build the wheel distribution, run the following command:
+bash
+Copy code
+python3 setup.py bdist_wheel
+This command generates a wheel distribution file for InFluence.
+Install the Package: Now, you can install the package using pip. Use the following command, replacing InFluence-1.0-py3-none-any.whl with the actual filename generated in Step 2:
+bash
+Copy code
+pip install dist/InFluence-1.0-py3-none-any.whl
+Usage
+
+To use InFluence, you can simply launch the Command Line Interface (CLI) with the following command:
+
+bash
+Copy code
+InFluence
+This command will start the InFluence CLI, allowing you to interact with the package and its functionalities.
+
+
+## Running tests 
+
+To run tests run the command PyTest in the Tsts directory.
+
+
+
+
+
+

Scripts/InFluence/InFluence.egg-info/PKG-INFO

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+Metadata-Version: 2.1
+Name: InFluence
+Version: 1.0
+Summary: UNKNOWN
+Home-page: UNKNOWN
+License: UNKNOWN
+Platform: UNKNOWN
+
+UNKNOWN
+

Scripts/InFluence/InFluence.egg-info/SOURCES.txt

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+main.py
+setup.py
+InFluence.egg-info/PKG-INFO
+InFluence.egg-info/SOURCES.txt
+InFluence.egg-info/dependency_links.txt
+InFluence.egg-info/entry_points.txt
+InFluence.egg-info/requires.txt
+InFluence.egg-info/top_level.txt
+interface_code/InFluence_CLI.py
+simulation/__init__.py
+simulation/simulation_interface.py
+simulation/cpp_simulation/__init__.py
+simulation/cpp_simulation/constants.py
+simulation/cpp_simulation/cpp_simulation_interface.py
+simulation/cuda_simulation/__init__.py
+simulation/cuda_simulation/constants.py
+simulation/cuda_simulation/cuda_kernel_wrapper.py
+simulation/cuda_simulation/gpu_simulation_interface.py
+simulation/python_simulation/__init__.py
+simulation/python_simulation/electron_object_constructor.py
+simulation/python_simulation/helper_functions.py
+simulation/python_simulation/mcss_python_functions.py
+simulation/python_simulation/mcss_python_functions_plot.py
+simulation/python_simulation/mcss_python_functions_sparse.py
+simulation/python_simulation/plot_trajectory_functions.py
+simulation/python_simulation/python_simulation_interface.py

Scripts/InFluence/InFluence.egg-info/dependency_links.txt

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+

Scripts/InFluence/InFluence.egg-info/entry_points.txt

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+[console_scripts]
+InFluence = interface_code.InFluence_CLI:main
+

Scripts/InFluence/InFluence.egg-info/requires.txt

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+argparse
+configparser
+inquirer
+matplotlib
+numpy

Scripts/InFluence/InFluence.egg-info/top_level.txt

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+simulation

Scripts/InFluence/__init__.py

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+#DO NOT DELTE