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testing.yml
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Fix for asterisks being incorporated after masking VCF. Test pipeline quickly #98: Commit 382257f pushed by watronfire
2m 10s master
master
2m 10s
Correct weird EOF for reference sometimes. Test pipeline quickly #97: Commit 9149c15 pushed by watronfire
2m 5s master
master
2m 5s
Update docker and test environment. Test pipeline quickly #96: Commit 0649e93 pushed by watronfire
2m 7s master
master
2m 7s
Update docker and test environment. Test pipeline quickly #95: Commit 0649e93 pushed by watronfire
2m 49s cmaple_implementation
cmaple_implementation
2m 49s
Use CMAPLE to reconstruct tree. Test pipeline quickly #94: Commit 2315c30 pushed by watronfire
2m 5s cmaple_implementation
cmaple_implementation
2m 5s
Added back files deleted locally. Test pipeline quickly #93: Commit 15accac pushed by watronfire
2m 3s master
master
2m 3s
Added back files deleted locally. Test pipeline quickly #92: Commit 5cad07e pushed by watronfire
1m 59s master
master
1m 59s
Merge branch 'refs/heads/depth_change' Test pipeline quickly #91: Commit baf7009 pushed by watronfire
2m 4s master
master
2m 4s
Refactor vcf to fasta script Test pipeline quickly #90: Commit 326b78f pushed by watronfire
2m 6s depth_change
depth_change
2m 6s
Update assemble.wdl Test pipeline quickly #89: Commit fcf35c0 pushed by watronfire
2m 1s 2025.08.21
2025.08.21
2m 1s
Merge pull request #5 from watronfire/master Test pipeline quickly #88: Commit c226157 pushed by watronfire
2m 6s master
master
2m 6s
Incorporate depth changes Test pipeline quickly #87: Pull request #5 opened by watronfire
2m 13s watronfire:master
watronfire:master
2m 13s
Update assemble.smk Test pipeline quickly #86: Commit c557f16 pushed by watronfire
2m 6s depth_change
depth_change
2m 6s
Specify flags for the correct command. Test pipeline quickly #85: Commit 2514ad4 pushed by watronfire
2m 17s depth_change
depth_change
2m 17s
Small change to redo docker build Test pipeline quickly #84: Commit 521d329 pushed by watronfire
2m 15s depth_change
depth_change
2m 15s
Update command.py Test pipeline quickly #83: Commit 1f33ba5 pushed by watronfire
2m 3s master
master
2m 3s
Add docker tag Test pipeline quickly #82: Commit 7b8a798 pushed by watronfire
2m 24s depth_change
depth_change
2m 24s
Samtools depth and samtools mpileup calculate depth identically now Test pipeline quickly #81: Commit e5f52c0 pushed by watronfire
2m 5s depth_change
depth_change
2m 5s
Allow multi-chromosome references. Test pipeline quickly #80: Commit ba1e194 pushed by watronfire
2m 9s master
master
2m 9s
Update environment.yaml Test pipeline quickly #79: Commit 8d5ad0f pushed by watronfire
2m 4s Xiao2025
Xiao2025
2m 4s