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Add a device that will calculate a beam centre #1757
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* Proof of concept device manager * Use fixtures parameter instead of **kwargs * Expand dependencies * Pre-optional handling * 'Working' optional dependencies * Docs, comments and warnings * Check for positional only arguments * Handle connections and support new loader in cli * Convert adsim to new loading * Add auto_connect to device manager * Remove references to connecting from device manager * DeviceResult wrappers * Demo adsim * build_and_connect method * Multiple manager CLI * FIXTUEES * Use device decorator for timeouts * Type build_and_connect and rely on fixtures for path provider * mostly reformatting * Make fixture generators lazy * Apologise for build_order method * Return function from fixture decorator * Add timeout parameter to build_and_connect * Remove dead comment * Use set in expand_dependencies to prevent repetition * Check for duplicate factory names * Add Ophyd v1 support * Connect Ophyd v1 devices * Move device_manager to new module Instead of burying it amongst the beamlines. * Remove test code from device_manager module * Remove debugging and commented code * Merge connectionspec and connectionparameters * Add or_raise method to DeviceBuildResult * Add docstrings * Use or_raise to handle build errors * Only set device name if required * Add TODOs to remove v1 support * Make v1 device timeout configurable * Default to waiting for v1 device connection * Add repr to v1 device factory * Split DeviceBuildResult devices and connection specs Makes access to the devices easier and makes it easier to build parameters * Remove device_type property from factories * Include fixture overrides in built devices * Fix duplication in factory repr * Add initial device_manager tests * Revert adsim changes for now * Enough tests to get full coverage Maybe enough tests to cover basic use * Create DeviceManager in fixture * Add test for docstrings * Reformat tests * Linting et al * Support single device manager name in CLI * Ignore mock type warnings * Appease pre-commit lints * Add tests for device manager use in CLI * Make 'devices' default name for device manager in CLI * Clean up TODO comments * Set return_value when creating mocks * Fix typing in v1_init decorator * Use ParamSpec when passing through __call__ * Handle or ignore var args * Update tests * Rename ignore skip test * Simplify LazyFixture __getitem__ * Used UserDict as base class for LazyFixtures * Make pyright happy * Remove need for type ignore --------- Co-authored-by: Robert Tuck <robert.tuck@diamond.ac.uk>
* Eiger changes from i04 beamline * Add test for two eiger stops being called at the same time * Revert async arming changes * Fix tests --------- Co-authored-by: Dominic Oram <dominic.oram@diamond.ac.uk>
* first try * add trigger function which writes to soft signals * small changes * get rid of max pixel location * add tests - need modifying as made with copilot * make triggerable for blesky plan * start to add max-pixel device in i04 (WIP because on beamline) * Finish adding device to i04.py * Add changes from beamline testing - from github * add comment for kernal size * attemt own tests * add my tests * add assert called onece tests * make changes from Dom's comments * add greyscale test * remove print statements in test * Fix merge issue --------- Co-authored-by: Dominic Oram <dominic.oram@diamond.ac.uk>
…n as the max pixel device (to blur and convert to greyscale)
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| # Level is the string description of the zoom level e.g. "1.0x" or "1.0" | ||
| self.level = epics_signal_rw(str, f"{prefix}MP:SELECT") | ||
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Need to refactor this to make more concise
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Yes, additionally they don't exist on i03 so we will need to make them optional
DominicOram
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Comments mostly reminders to myself
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| # Level is the string description of the zoom level e.g. "1.0x" or "1.0" | ||
| self.level = epics_signal_rw(str, f"{prefix}MP:SELECT") | ||
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Yes, additionally they don't exist on i03 so we will need to make them optional
| contour_array = np.array( | ||
| [[[10, 10]], [[10, 50]], [[50, 50]], [[50, 10]]], dtype=np.uint8 | ||
| ) |
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Should: This isn't used, remove
| from ophyd_async.core import init_devices | ||
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| from dodal.devices.i04.beam_centre import CentreEllipseMethod, binary_img | ||
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Good tests, I would probably add one that is the whole thing from realistic data through to an actual centre
…mondLightSource/dodal into 1726_beam_centre_device_post_testing
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## main #1757 +/- ##
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Coverage 99.12% 99.13%
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Files 286 287 +1
Lines 10794 10861 +67
=======================================
+ Hits 10700 10767 +67
Misses 94 94 ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
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olliesilvester
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Nice PR - only some minor comments
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| # kernel size describes how many of the neighbouring pixels are used for the blur, | ||
| # higher kernal size means more of a blur effect | ||
| kernel_size = (7, 7) |
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Could: Move this into a constant
Fixes #1726
Instructions to reviewer on how to test:
Checks for reviewer
dodal connect ${BEAMLINE}