feat: created gilpinflowssystem and demo#115
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Added a new system class in src/dynadojo/systems for all of Gilpin's continuous systems (imported from dysts.flows). Added a demo in demos/systems to test those systems.
- Identify principal components that cover up to 90% variance - Use the remaining principal components (if j = d, then choose j = d-1) for OOD generation
mkanwal
requested changes
Jul 26, 2024
carynbear
requested changes
Jul 26, 2024
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Can you add your system to tests/test_deterministic.py all you need to do is import and add to the systems list. Then run the tests (see contributing.md) to make sure it passes.
Also fix any comments from @mkanwal and me?
* changed all params.json and params_file to config.json and config_file * changed all params.json and params_file to config.json and config_file. Made experiments config file and ran experiment. All works * changed last thing from save_params -> save_config --------- Co-authored-by: Caryn Tran <caryn.tran@berkeley.edu>
Resolves DynaDojo#67 Co-authored-by: lmclane23 <101528096+lmclane23@users.noreply.github.com>
…nditions Changed gilpin_flows demo to plot OOD initial points and also to test OOD points generation for all systems
added GilpinFlowsSystem to test_deterministic file added dysts as optional gilpin system dependency in pyproject.toml added comments to gilpin_flows.py added class method to search for all available gilpin systems
mkanwal
reviewed
Aug 1, 2024
mkanwal
reviewed
Aug 1, 2024
mkanwal
reviewed
Aug 1, 2024
also adjusted GIlpinFlowsSystem parameters to take on a default value
Fixes order of parameters in gilpin flows demo. Adds warning messages for wrong inputted dimensions. Adds function return type for make_data.
carynbear
approved these changes
Aug 6, 2024
generate initial conditions along the sample trajectory. Perturb points by an amount proportional to the mean and variance of the sample trajectory.
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Added a new system class in src/dynadojo/systems for all of Gilpin's continuous systems (imported from dysts.flows).
Added a demo in demos/systems to test those systems.