Changes for DESY202405 test beam

DESY202405/config/align_dut_DESY-GAP18SQ_HV10.conf

@@ -0,0 +1,60 @@
+[Corryvreckan]
+log_level  = "INFO"
+log_format = "DEFAULT"
+
+detectors_file         = "../geometry/DESY-GAP18SQ_HV10_prealigned_dut.conf"
+detectors_file_updated = "../geometry/DESY-GAP18SQ_HV10_aligned_dut.conf"
+histogram_file         = "alignment_dut_DESY-GAP18SQ_HV10.root"
+
+number_of_events = -1
+
+[Metronome]
+triggers=1
+
+[EventLoaderEUDAQ2]
+file_name = "../data/ce65v2_pcb02_hv10_beam_run482100624_231128100629.raw"
+
+[ClusteringSpatial]
+type=ALPIDE
+use_trigger_timestamp=false
+charge_weighting=true
+reject_by_roi=true
+
+[ClusteringAnalog]
+name=CE65_6
+# reject_by_roi=true        # ROI rejection for cluster
+analysis_shape=true
+window_size=1             # matrix width to find neighbours
+threshold_type="mix"
+threshold_seed=900         # Cut to find seeds
+threshold_neighbor=100   # Cut to find neighbours
+thresholdSNR_seed = 9
+thresholdSNR_neighbor = 1
+method=cluster            # Clustering method - cluster, seed, sum3x3
+seeding_method=multi      # Seed selection - multi, max (single seed with max. charge)
+calibration_pedestal=hPedestalpl1 # CE65 calibration file ROOT::TH2F
+calibration_noise=hnoisepl1    # CE65 calibration file ROOT::TH2F
+
+[Tracking4D]
+#track_model="straightline"
+track_model="gbl"
+require_detectors=ALPIDE_0,ALPIDE_1,ALPIDE_2,ALPIDE_3,ALPIDE_4,ALPIDE_5
+min_hits_on_track=6
+time_cut_abs=10s
+momentum=4GeV
+exclude_dut = true
+spatial_cut_abs=100um,100um
+reject_by_roi=false
+
+[DUTAssociation]
+#log_level="DEBUG"
+spatial_cut_abs=100um,100um
+time_cut_abs=1e99
+use_cluster_centre=true
+
+[AlignmentDUTResidual]
+iterations=3
+align_position=true
+align_position_axes=xy
+align_orientation_axes="z"
+max_track_chi2ndof=2

DESY202405/config/align_tel_DESY-GAP18SQ_HV10.conf

@@ -0,0 +1,44 @@
+[Corryvreckan]
+log_level  = "INFO"
+log_format = "DEFAULT"
+
+detectors_file         = "../geometry/DESY-GAP18SQ_HV10_prealigned_tel.conf"
+detectors_file_updated = "../geometry/DESY-GAP18SQ_HV10_aligned_tel.conf"
+histogram_file         = "alignment_tel_DESY-GAP18SQ_HV10.root"
+
+number_of_events = -1
+
+[Metronome]
+triggers=1
+
+[EventLoaderEUDAQ2]
+file_name = "../data/ce65v2_pcb02_hv10_beam_run482100624_231128100629.raw"
+
+[ClusteringSpatial]
+type=ALPIDE
+use_trigger_timestamp=false
+charge_weighting=true
+reject_by_roi=false
+
+# [Correlations]
+
+[Tracking4D]
+track_model="straightline"
+#track_model="gbl"
+require_detectors=ALPIDE_0,ALPIDE_1,ALPIDE_2,ALPIDE_3,ALPIDE_4,ALPIDE_5
+min_hits_on_track=6
+time_cut_abs=10s
+momentum=4GeV
+exclude_dut = true
+spatial_cut_abs=100um,100um
+reject_by_roi=false
+
+[AlignmentMillepede]
+residual_cut = 0.05mm
+residual_cut_init = 1mm
+iterations = 3
+dofs = true, true, false, false, false, true
+sigmas = 50um, 50um, 50um, 0.005rad, 0.005rad, 0.005rad
+exclude_dut = true
+number_of_stddev = 0
+convergence = 10e-5

DESY202405/config/analysis_DESY-GAP18SQ_HV10.conf

@@ -0,0 +1,87 @@
+[Corryvreckan]
+log_level  = "INFO"
+log_format = "DEFAULT"
+#log_level  = "TRACE"
+#log_format = "LONG"
+
+detectors_file         = "../geometry/DESY-GAP18SQ_HV10_aligned_dut.conf"
+detectors_file_updated = "../geometry/DESY-GAP18SQ_HV10_aligned_dut_analysed.conf"
+histogram_file="analysis_DESY-GAP18SQ_HV10_482100624_231128100629_seedthr200_nbh50_snr3_cluster.root"
+
+number_of_events = -1
+
+[Metronome]
+triggers=1
+
+[EventLoaderEUDAQ2]
+file_name = "../data/ce65v2_pcb02_hv10_beam_run482100624_231128100629.raw"
+
+
+[ClusteringSpatial]
+type=ALPIDE
+use_trigger_timestamp=false
+charge_weighting=true
+reject_by_roi=true
+
+[ClusteringAnalog]
+# log_level  = "DEBUG"
+name=CE65_6
+reject_by_roi=true        # ROI rejection for cluster
+analysis_shape=true
+window_size=1             # matrix width to find neighbours
+threshold_type="fix"
+threshold_seed=200         # Cut to find seeds
+threshold_neighbor=50   # Cut to find neighbours
+thresholdSNR_seed = 3
+thresholdSNR_neighbor = 2
+method=cluster            # Clustering method - cluster, seed, window
+# method="window"            # Clustering method - cluster, seed, window
+seeding_method=multi      # Seed selection - multi, max (single seed with max. charge)
+calibration_pedestal=hPedestalpl1 # CE65 calibration file ROOT::TH2F
+calibration_noise=hnoisepl1    # CE65 calibration file ROOT::TH2F
+
+[Correlations]
+
+
+[Tracking4D]
+track_model="straightline"
+require_detectors=ALPIDE_0,ALPIDE_1,ALPIDE_2,ALPIDE_3,ALPIDE_4,ALPIDE_5
+min_hits_on_track=6
+time_cut_abs=10s
+momentum=4GeV
+exclude_dut = true
+spatial_cut_abs=100um,100um
+reject_by_roi=true
+# unique_cluster_usage=true
+
+[DUTAssociation]
+# log_level  = "DEBUG"
+spatial_cut_abs=100um,100um
+time_cut_abs=1e99
+use_cluster_centre=true
+
+[AnalysisCE65]
+# log_level  = "DEBUG"
+name=CE65_6
+use_closest_cluster=true
+chi2ndof_cut=1
+spatial_cut_sensoredge=2
+correlations=true
+n_charge_bins=20000
+charge_histo_range=20000
+raw_histo_range=20000
+calibration_pedestal=hPedestalpl1 # CE65 calibration file - TH2D pedestal
+calibration_noise=hnoisepl1    # CE65 calibration file - TH2D noise amp.
+threshold_seed=200         # Cut to find seeds
+thresholdSNR_seed=3
+
+[AnalysisEfficiency]
+time_cut_frameedge=20ns
+chi2ndof_cut=5
+prune_tracks = true
+use_closest_cluster=true 
+inpixel_bin_size=1um
+spatial_cut_sensoredge=1
+
+
+[AnalysisTracks]

DESY202405/config/prealign_dut_DESY-GAP18SQ_HV10.conf

@@ -0,0 +1,59 @@
+[Corryvreckan]
+log_level  = "WARNING"
+log_format = "DEFAULT"
+
+detectors_file         = "../geometry/DESY-GAP18SQ_HV10_aligned_tel.conf"
+detectors_file_updated = "../geometry/DESY-GAP18SQ_HV10_prealigned_dut.conf"
+histogram_file         = "prealignment_dut_DESY-GAP18SQ_HV10.root"
+
+number_of_events = -1
+
+[Metronome]
+triggers=1
+
+[EventLoaderEUDAQ2]
+file_name = "../data/ce65v2_pcb02_hv10_beam_run482100624_231128100629.raw"
+
+[ClusteringSpatial]
+type=ALPIDE
+use_trigger_timestamp=false
+charge_weighting=true
+reject_by_roi=false
+
+
+[ClusteringAnalog]
+name=CE65_6
+# reject_by_roi=true        # ROI rejection for cluster
+analysis_shape=true
+window_size=1             # matrix width to find neighbours
+threshold_type="mix"
+threshold_seed=900         # Cut to find seeds
+threshold_neighbor=100   # Cut to find neighbours
+thresholdSNR_seed = 9
+thresholdSNR_neighbor = 1
+method=cluster            # Clustering method - cluster, seed, sum3x3
+seeding_method=multi      # Seed selection - multi, max (single seed with max. charge)
+calibration_pedestal=hPedestalpl1 # CE65 calibration file ROOT::TH2F
+calibration_noise=hnoisepl1    # CE65 calibration file ROOT::TH2F
+
+# name=CE65_4
+# reject_by_roi=true        # ROI rejection for cluster
+# analysis_shape=true
+# window_size=3             # matrix width to find neighbours
+# threshold_type="mix"
+# threshold_seed=10         # Cut to find seeds
+# threshold_neighbour=1   # Cut to find neighbours
+# method=cluster            # Clustering method - cluster, seed, sum3x3
+# seeding_method=multi      # Seed selection - multi, max (single seed with max. charge)
+# calibration_pedestal=hPedestalpl1 # CE65 calibration file ROOT::TH2F
+# calibration_noise=hnoisepl1    # CE65 calibration file ROOT::TH2F
+
+[Correlations]
+
+[Prealignment]
+name = CE65_6
+damping_factor=1
+max_correlation_rms=6mm
+method=gauss_fit
+fit_range_rel=100
+time_cut_abs=1e99

DESY202405/config/prealign_tel_DESY-GAP18SQ_HV10.conf

@@ -0,0 +1,33 @@
+[Corryvreckan]
+log_level  = "WARNING"
+log_format = "DEFAULT"
+
+detectors_file         = "../geometry/DESY-GAP18SQ_HV10.geo"
+detectors_file_updated = "../geometry/DESY-GAP18SQ_HV10_prealigned_tel.conf"
+histogram_file         = "prealignment_tel_DESY-GAP18SQ_HV10.root"
+
+number_of_events = -1
+
+[Metronome]
+triggers=1
+
+[EventLoaderEUDAQ2]
+file_name = "../data/ce65v2_pcb02_hv10_beam_run482100624_231128100629.raw"
+#log_level  = "DEBUG"
+
+[ClusteringSpatial]
+type=ALPIDE
+use_trigger_timestamp=false
+charge_weighting=true
+reject_by_roi=false
+
+[Correlations]
+
+[Prealignment]
+type = ALPIDE
+damping_factor=1
+max_correlation_rms=6mm
+method=gauss_fit
+fit_range_rel=90
+#range_abs=15
+time_cut_abs=1e99       # no timestamp for CE65 now, use max value to disable time cuts

DESY202405/geometry/DESY-GAP18SQ_HV10.geo

@@ -0,0 +1,101 @@
+#Geometry file for CE65 for May 2022 beam test at PS-CERN
+#Telescope B1, https://twiki.cern.ch/twiki/bin/viewauth/ALICE/ITS3WP3PS2022May
+
+[ALPIDE_0]
+type = "ALPIDE"
+position = 0um,0um,0mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.001
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane0.txt"
+orientation = 0deg, 0deg, 0deg
+
+[ALPIDE_1]
+type = "ALPIDE"
+position = 0um,0um,25mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.0005
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane1.txt"
+orientation = 0deg, 0deg, 0deg
+
+[ALPIDE_2]
+type = "ALPIDE"
+position = 0um,0um,50mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.0005
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane2.txt"
+orientation = 0deg, 0deg, 0deg
+
+[ALPIDE_3]
+type = "ALPIDE"
+position = 0um,0um,125mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.0005
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane3.txt"
+orientation = 0deg, 0deg, 0deg
+role = "reference"
+
+[ALPIDE_4]
+type = "ALPIDE"
+position = 0um,0um,150mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.001
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane4.txt"
+orientation = 0deg, 0deg, 0deg
+
+[ALPIDE_5]
+type = "ALPIDE"
+position = 0um,0um,175mm
+number_of_pixels = 1024,512
+pixel_pitch = 29.24um, 26.88um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.0005
+coordinates = "cartesian"
+orientation_mode = "xyz"
+# orientation = 180deg, 180deg, 0deg
+mask_file="../../../DESY202311/masks/ref-plane5.txt"
+orientation = 0deg, 0deg, 0deg
+
+[CE65_6]
+type = "CE65V2"
+orientation_mode = "xyz"
+orientation = 180deg, 180deg, 0deg
+position = 0um,0mm,75mm
+number_of_pixels = 8,8
+pixel_pitch = 18um, 18um
+spatial_resolution = 5.00um, 5.00um
+time_resolution = 2us
+material_budget = 0.0005
+coordinates = "cartesian"
+calibration_file = "../qa/DESY-GAP18SQ_HV10-noisemap.root"
+role = "dut"