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Pin AlphaFold structures for StructAlign test to avoid version drift#48

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timholy merged 1 commit intomainfrom
teh/affix
Mar 18, 2026
Merged

Pin AlphaFold structures for StructAlign test to avoid version drift#48
timholy merged 1 commit intomainfrom
teh/affix

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@timholy timholy commented Mar 18, 2026

tmalign.txt was generated from AlphaFold v4 models; the EBI API now serves v6, whose coordinates differ enough to fail the alignment quality assertions. Add pinned v4 PDB files for K7N701 and K7N778 under test/PDBs/ and load them directly in the StructAlign test, keeping the download functionality test unaffected.

tmalign.txt was generated from AlphaFold v4 models; the EBI API now
serves v6, whose coordinates differ enough to fail the alignment
quality assertions. Add pinned v4 PDB files for K7N701 and K7N778
under test/PDBs/ and load them directly in the StructAlign test,
keeping the download functionality test unaffected.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
@timholy timholy merged commit 9a1fc59 into main Mar 18, 2026
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@timholy timholy deleted the teh/affix branch March 18, 2026 17:46
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