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@MSDLLCpapers

MSD Inventing for Life

This GitHub's main purpose is to house open source code repositories published by MSD for public use ,research, and for publications outside the United States

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  1. ovo ovo Public

    OVO, an open-source ecosystem for de novo protein design

    Python 93 16

  2. obsidian obsidian Public

    Algorithmic process optimization and AI experiment design

    Python 44 8

  3. promb promb Public

    Humanness of de-novo designed proteins

    Jupyter Notebook 35 6

  4. AbMelt AbMelt Public

    Python 27 8

  5. dedenser dedenser Public

    A Python tool for creating and downsampling chemical pointclouds.

    Python 12 2

  6. teal-agents teal-agents Public

    Python 10 6

Repositories

Showing 10 of 42 repositories
  • dynamicpv Public

    Evaluate present values and cost-effectiveness with dynamic pricing and uptake

    MSDLLCpapers/dynamicpv’s past year of commit activity
    R 6 GPL-3.0 4 0 0 Updated Jan 7, 2026
  • adp Public
    MSDLLCpapers/adp’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 6, 2026
  • teal-agents Public
    MSDLLCpapers/teal-agents’s past year of commit activity
    Python 10 6 0 0 Updated Jan 5, 2026
  • General-PepMNet Public

    Generalization of PepMNet to allow for non-canonical amino acids and more complex peptide topologies

    MSDLLCpapers/General-PepMNet’s past year of commit activity
    Python 0 1 0 0 Updated Jan 5, 2026
  • py-pkglite Public

    A simple framework for packing source packages written in any programming language into a text file and restoring them into the original directory structure

    MSDLLCpapers/py-pkglite’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Jan 2, 2026
  • AnNoBrainer Public
    MSDLLCpapers/AnNoBrainer’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Jan 2, 2026
  • ovo-proteindj Public
    MSDLLCpapers/ovo-proteindj’s past year of commit activity
    Python 1 MIT 1 0 1 Updated Dec 19, 2025
  • MRL-MC-Retention Public

    Repository for multiple condition retention time modeling (MC-Retention) and Multiple Condition adjusted Retention Time (MCaRT) dataset.

    MSDLLCpapers/MRL-MC-Retention’s past year of commit activity
    Python 0 1 0 0 Updated Dec 17, 2025
  • IBMDPDesigns.jl Public

    Sequential planning of experimental designs under resource and target constraints.

    MSDLLCpapers/IBMDPDesigns.jl’s past year of commit activity
    Julia 0 0 0 0 Updated Dec 11, 2025
  • miRQuest Public

    An RShiny app for the analysis of high-throughput miRNA sequencing data

    MSDLLCpapers/miRQuest’s past year of commit activity
    R 0 1 0 0 Updated Dec 11, 2025
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