DEVOPS-922: build a Python environment for Analyst 4.7 development

.pre-commit-config.yaml

@@ -11,11 +11,11 @@ ci:
     autoupdate_schedule: monthly
 
 repos:
--   repo: https://github.com/python-poetry/poetry
-    rev: 2.2.1
-    hooks:
-    -   id: poetry-check
-        args: [--no-plugins]
+# -   repo: https://github.com/python-poetry/poetry  # TODO: re-enable with pixi (does not support source=pypi)
+#     rev: 2.2.1
+#     hooks:
+#     -   id: poetry-check
+#         args: [--no-plugins]
 -   repo: https://github.com/hadialqattan/pycln
     rev: v2.6.0
     hooks:

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: c673a224b6a128d7a5be2ae3cc61985682147dba1ef082272e749eff0a34af2b
+# input_hash: 04182781a63ead68e8e7c31d9a09e754d8ad6f0d4d41762585826d02943a60e8
 
 channels:
   - conda-forge
@@ -110,7 +110,7 @@ dependencies:
   - libbrotlidec=1.2.0=hd53d788_0
   - libbrotlienc=1.2.0=h02bd7ab_0
   - libcblas=3.9.0=37_hfef963f_mkl
-  - libcurl=8.16.0=h4e3cde8_0
+  - libcurl=8.17.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
@@ -134,7 +134,7 @@ dependencies:
   - libscotch=7.0.6=hea33c07_1
   - libsodium=1.0.20=h4ab18f5_0
   - libspatialindex=2.0.0=he02047a_0
-  - libsqlite=3.50.4=h0c1763c_0
+  - libsqlite=3.51.0=hee844dc_0
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
@@ -147,7 +147,7 @@ dependencies:
   - libxml2=2.15.1=h26afc86_0
   - libxml2-16=2.15.1=ha9997c6_0
   - libzlib=1.3.1=hb9d3cd8_2
-  - llvm-openmp=21.1.4=h4922eb0_0
+  - llvm-openmp=21.1.5=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=4.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310h3406613_0
@@ -205,7 +205,7 @@ dependencies:
   - pymatsolver=0.3.1=pyh48887ae_201
   - pyparsing=3.2.5=pyhcf101f3_0
   - pysocks=1.7.1=pyha55dd90_7
-  - pytest=8.4.2=pyhd8ed1ab_0
+  - pytest=8.4.2=pyhcf101f3_1
   - pytest-cov=7.0.0=pyhcf101f3_1
   - python=3.10.19=h3c07f61_2_cpython
   - python-dateutil=2.9.0.post0=pyhe01879c_2
@@ -261,7 +261,7 @@ dependencies:
   - typing_extensions=4.15.0=pyhcf101f3_0
   - typing_utils=0.1.0=pyhd8ed1ab_1
   - tzdata=2025b=h78e105d_0
-  - unicodedata2=16.0.0=py310h7c4b9e2_1
+  - unicodedata2=17.0.0=py310h7c4b9e2_0
   - uri-template=1.3.0=pyhd8ed1ab_1
   - urllib3=2.5.0=pyhd8ed1ab_0
   - wcwidth=0.2.14=pyhd8ed1ab_0
@@ -282,10 +282,10 @@ dependencies:
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
+    - geoapps-utils == 0.6.0b1 --hash=sha256:51278b061cb1a884c2609381c6189ac19ed84fc42a5bb81dd9a63f911a0f8d65
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
+    - grid-apps == 0.1.0b2 --hash=sha256:36896a6c272ba074aabf882ffb3d288dc816400d720564a41faa561c3dfc3c8b
+    - mira-simpeg == 0.23.0.2b3 --hash=sha256:05a809903fd5871ed0a6b3b7ad3f25f4980fffb65e925e45be3d244466217ac9
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: c673a224b6a128d7a5be2ae3cc61985682147dba1ef082272e749eff0a34af2b
+# input_hash: 04182781a63ead68e8e7c31d9a09e754d8ad6f0d4d41762585826d02943a60e8
 
 channels:
   - conda-forge
@@ -55,7 +55,7 @@ dependencies:
   - libbrotlidec=1.2.0=hd53d788_0
   - libbrotlienc=1.2.0=h02bd7ab_0
   - libcblas=3.9.0=37_hfef963f_mkl
-  - libcurl=8.16.0=h4e3cde8_0
+  - libcurl=8.17.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
@@ -78,7 +78,7 @@ dependencies:
   - libpng=1.6.50=h421ea60_1
   - libscotch=7.0.6=hea33c07_1
   - libspatialindex=2.0.0=he02047a_0
-  - libsqlite=3.50.4=h0c1763c_0
+  - libsqlite=3.51.0=hee844dc_0
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
@@ -90,7 +90,7 @@ dependencies:
   - libxml2=2.15.1=h26afc86_0
   - libxml2-16=2.15.1=ha9997c6_0
   - libzlib=1.3.1=hb9d3cd8_2
-  - llvm-openmp=21.1.4=h4922eb0_0
+  - llvm-openmp=21.1.5=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310h3406613_0
   - matplotlib-base=3.8.4=py310hef631a5_2
@@ -145,7 +145,7 @@ dependencies:
   - typing-inspection=0.4.2=pyhd8ed1ab_0
   - typing_extensions=4.15.0=pyhcf101f3_0
   - tzdata=2025b=h78e105d_0
-  - unicodedata2=16.0.0=py310h7c4b9e2_1
+  - unicodedata2=17.0.0=py310h7c4b9e2_0
   - urllib3=2.5.0=pyhd8ed1ab_0
   - wheel=0.45.1=pyhd8ed1ab_1
   - xorg-libxau=1.0.12=hb9d3cd8_0
@@ -158,10 +158,10 @@ dependencies:
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
+    - geoapps-utils == 0.6.0b1 --hash=sha256:51278b061cb1a884c2609381c6189ac19ed84fc42a5bb81dd9a63f911a0f8d65
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
+    - grid-apps == 0.1.0b2 --hash=sha256:36896a6c272ba074aabf882ffb3d288dc816400d720564a41faa561c3dfc3c8b
+    - mira-simpeg == 0.23.0.2b3 --hash=sha256:05a809903fd5871ed0a6b3b7ad3f25f4980fffb65e925e45be3d244466217ac9
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: 9b503869bc7e786a533feb6a7506ee8667954a8f63b525adb0dec96dab963cd5
+# input_hash: da80cf40edcb5c1cfb9414b6e2a88c9cf5fbd765ef1e5975629a2f373cc4776a
 
 channels:
   - conda-forge
@@ -106,7 +106,7 @@ dependencies:
   - libbrotlidec=1.2.0=h431afc6_0
   - libbrotlienc=1.2.0=ha521d6b_0
   - libcblas=3.9.0=35_h2a3cdd5_mkl
-  - libcurl=8.16.0=h43ecb02_0
+  - libcurl=8.17.0=h43ecb02_0
   - libdeflate=1.25=h51727cc_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libexpat=2.7.1=hac47afa_0
@@ -123,7 +123,7 @@ dependencies:
   - libpng=1.6.50=h7351971_1
   - libsodium=1.0.20=hc70643c_0
   - libspatialindex=2.0.0=h5a68840_0
-  - libsqlite=3.50.4=hf5d6505_0
+  - libsqlite=3.51.0=hf5d6505_0
   - libssh2=1.11.1=h9aa295b_0
   - libtiff=4.7.1=h8f73337_1
   - libwebp-base=1.6.0=h4d5522a_0
@@ -132,7 +132,7 @@ dependencies:
   - libxml2=2.15.1=h5d26750_0
   - libxml2-16=2.15.1=h692994f_0
   - libzlib=1.3.1=h2466b09_2
-  - llvm-openmp=21.1.4=hfa2b4ca_0
+  - llvm-openmp=21.1.5=hfa2b4ca_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=4.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310hdb0e946_0
@@ -185,7 +185,7 @@ dependencies:
   - pymatsolver=0.3.1=pyh48887ae_201
   - pyparsing=3.2.5=pyhcf101f3_0
   - pysocks=1.7.1=pyh09c184e_7
-  - pytest=8.4.2=pyhd8ed1ab_0
+  - pytest=8.4.2=pyhcf101f3_1
   - pytest-cov=7.0.0=pyhcf101f3_1
   - python=3.10.19=hc20f281_2_cpython
   - python-dateutil=2.9.0.post0=pyhe01879c_2
@@ -243,7 +243,7 @@ dependencies:
   - typing_utils=0.1.0=pyhd8ed1ab_1
   - tzdata=2025b=h78e105d_0
   - ucrt=10.0.26100.0=h57928b3_0
-  - unicodedata2=16.0.0=py310h29418f3_1
+  - unicodedata2=17.0.0=py310h29418f3_0
   - uri-template=1.3.0=pyhd8ed1ab_1
   - urllib3=2.5.0=pyhd8ed1ab_0
   - vc=14.3=h2b53caa_32
@@ -268,10 +268,10 @@ dependencies:
   - zstandard=0.25.0=py310h1637853_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
+    - geoapps-utils == 0.6.0b1 --hash=sha256:51278b061cb1a884c2609381c6189ac19ed84fc42a5bb81dd9a63f911a0f8d65
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
+    - grid-apps == 0.1.0b2 --hash=sha256:36896a6c272ba074aabf882ffb3d288dc816400d720564a41faa561c3dfc3c8b
+    - mira-simpeg == 0.23.0.2b3 --hash=sha256:05a809903fd5871ed0a6b3b7ad3f25f4980fffb65e925e45be3d244466217ac9
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: 9b503869bc7e786a533feb6a7506ee8667954a8f63b525adb0dec96dab963cd5
+# input_hash: da80cf40edcb5c1cfb9414b6e2a88c9cf5fbd765ef1e5975629a2f373cc4776a
 
 channels:
   - conda-forge
@@ -51,7 +51,7 @@ dependencies:
   - libbrotlidec=1.2.0=h431afc6_0
   - libbrotlienc=1.2.0=ha521d6b_0
   - libcblas=3.9.0=35_h2a3cdd5_mkl
-  - libcurl=8.16.0=h43ecb02_0
+  - libcurl=8.17.0=h43ecb02_0
   - libdeflate=1.25=h51727cc_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libexpat=2.7.1=hac47afa_0
@@ -67,7 +67,7 @@ dependencies:
   - liblzma=5.8.1=h2466b09_2
   - libpng=1.6.50=h7351971_1
   - libspatialindex=2.0.0=h5a68840_0
-  - libsqlite=3.50.4=hf5d6505_0
+  - libsqlite=3.51.0=hf5d6505_0
   - libssh2=1.11.1=h9aa295b_0
   - libtiff=4.7.1=h8f73337_1
   - libwebp-base=1.6.0=h4d5522a_0
@@ -76,7 +76,7 @@ dependencies:
   - libxml2=2.15.1=h5d26750_0
   - libxml2-16=2.15.1=h692994f_0
   - libzlib=1.3.1=h2466b09_2
-  - llvm-openmp=21.1.4=hfa2b4ca_0
+  - llvm-openmp=21.1.5=hfa2b4ca_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310hdb0e946_0
   - matplotlib-base=3.8.4=py310hadb10a8_2
@@ -128,7 +128,7 @@ dependencies:
   - typing_extensions=4.15.0=pyhcf101f3_0
   - tzdata=2025b=h78e105d_0
   - ucrt=10.0.26100.0=h57928b3_0
-  - unicodedata2=16.0.0=py310h29418f3_1
+  - unicodedata2=17.0.0=py310h29418f3_0
   - urllib3=2.5.0=pyhd8ed1ab_0
   - vc=14.3=h2b53caa_32
   - vc14_runtime=14.44.35208=h818238b_32
@@ -145,10 +145,10 @@ dependencies:
   - zstandard=0.25.0=py310h1637853_0
   - zstd=1.5.7=hbeecb71_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
+    - geoapps-utils == 0.6.0b1 --hash=sha256:51278b061cb1a884c2609381c6189ac19ed84fc42a5bb81dd9a63f911a0f8d65
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
+    - grid-apps == 0.1.0b2 --hash=sha256:36896a6c272ba074aabf882ffb3d288dc816400d720564a41faa561c3dfc3c8b
+    - mira-simpeg == 0.23.0.2b3 --hash=sha256:05a809903fd5871ed0a6b3b7ad3f25f4980fffb65e925e45be3d244466217ac9
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.11-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 2cf872f5d12711990e183c3d2fccf4d430fa0049778fa650827c2a7efa8fbf72
+# input_hash: c2eb8ea440937825b991f1a9ca495d24a3ae8d501aaa0c5e6da2624aebf55dac
 
 channels:
   - conda-forge
@@ -73,7 +73,7 @@ dependencies:
   - importlib-metadata=8.7.0=pyhe01879c_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - ipykernel=7.1.0=pyha191276_0
-  - ipython=9.6.0=pyhfa0c392_0
+  - ipython=9.7.0=pyh53cf698_0
   - ipython_genutils=0.2.0=pyhd8ed1ab_2
   - ipython_pygments_lexers=1.1.1=pyhd8ed1ab_0
   - ipywidgets=7.8.5=pyhd8ed1ab_0
@@ -112,7 +112,7 @@ dependencies:
   - libbrotlidec=1.2.0=hd53d788_0
   - libbrotlienc=1.2.0=h02bd7ab_0
   - libcblas=3.9.0=37_hfef963f_mkl
-  - libcurl=8.16.0=h4e3cde8_0
+  - libcurl=8.17.0=h4e3cde8_0
   - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
@@ -136,7 +136,7 @@ dependencies:
   - libscotch=7.0.6=hea33c07_1
   - libsodium=1.0.20=h4ab18f5_0
   - libspatialindex=2.0.0=he02047a_0
-  - libsqlite=3.50.4=h0c1763c_0
+  - libsqlite=3.51.0=hee844dc_0
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
@@ -149,7 +149,7 @@ dependencies:
   - libxml2=2.15.1=h26afc86_0
   - libxml2-16=2.15.1=ha9997c6_0
   - libzlib=1.3.1=hb9d3cd8_2
-  - llvm-openmp=21.1.4=h4922eb0_0
+  - llvm-openmp=21.1.5=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=4.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py311h3778330_0
@@ -187,7 +187,6 @@ dependencies:
   - parso=0.8.5=pyhcf101f3_0
   - partd=1.4.2=pyhd8ed1ab_0
   - pexpect=4.9.0=pyhd8ed1ab_1
-  - pickleshare=0.7.5=pyhd8ed1ab_1004
   - pillow=10.3.0=py311h82a398c_1
   - pip=25.2=pyh8b19718_0
   - platformdirs=4.5.0=pyhcf101f3_0
@@ -207,7 +206,7 @@ dependencies:
   - pymatsolver=0.3.1=pyh48887ae_201
   - pyparsing=3.2.5=pyhcf101f3_0
   - pysocks=1.7.1=pyha55dd90_7
-  - pytest=8.4.2=pyhd8ed1ab_0
+  - pytest=8.4.2=pyhcf101f3_1
   - pytest-cov=7.0.0=pyhcf101f3_1
   - python=3.11.14=hd63d673_2_cpython
   - python-dateutil=2.9.0.post0=pyhe01879c_2
@@ -263,7 +262,7 @@ dependencies:
   - typing_extensions=4.15.0=pyhcf101f3_0
   - typing_utils=0.1.0=pyhd8ed1ab_1
   - tzdata=2025b=h78e105d_0
-  - unicodedata2=16.0.0=py311h49ec1c0_1
+  - unicodedata2=17.0.0=py311h49ec1c0_0
   - uri-template=1.3.0=pyhd8ed1ab_1
   - urllib3=2.5.0=pyhd8ed1ab_0
   - wcwidth=0.2.14=pyhd8ed1ab_0
@@ -285,10 +284,10 @@ dependencies:
   - zstandard=0.25.0=py311haee01d2_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
+    - geoapps-utils == 0.6.0b1 --hash=sha256:51278b061cb1a884c2609381c6189ac19ed84fc42a5bb81dd9a63f911a0f8d65
+    - geoh5py == 0.12.0b3 --hash=sha256:59932ee0ba044509c4389b547d50e381f62e32eea8c5e22d69526880a37489b5
+    - grid-apps == 0.1.0b2 --hash=sha256:36896a6c272ba074aabf882ffb3d288dc816400d720564a41faa561c3dfc3c8b
+    - mira-simpeg == 0.23.0.2b3 --hash=sha256:05a809903fd5871ed0a6b3b7ad3f25f4980fffb65e925e45be3d244466217ac9
 
 variables:
   KMP_WARNINGS: 0