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chore: Release Prep 2.5.0#128

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sameeul merged 8 commits intoPolusAI:masterfrom
sameeul:feat/zarrv3-via-tensorstore
Feb 17, 2026
Merged

chore: Release Prep 2.5.0#128
sameeul merged 8 commits intoPolusAI:masterfrom
sameeul:feat/zarrv3-via-tensorstore

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@sameeul sameeul commented Feb 17, 2026

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sameeul and others added 8 commits February 13, 2026 16:43
Implement automatic zarr format detection (v2 vs v3) in the tensorstore
backend. The backend now correctly handles both zarr v2 and v3 stores by:

- Detecting zarr format using detect_zarr_format() utility
- Setting appropriate FileType (OmeZarrV2 or OmeZarrV3) for TSReader/TSWriter
- Using format-specific child enumeration:
  * v2: filesystem fallback (_list_zarr_children) for reliability
  * v3: native zarr-python array_keys()/group_keys() methods
- Parsing metadata from both v2 (attrs["multiscales"]) and v3
  (attrs["ome"]["multiscales"]) locations per NGFF 0.5 spec

Writer maintains backward compatibility by defaulting to v2 format.

Added comprehensive test coverage:
- test_read_zarr_v3: Basic v3 zarr reading with tensorstore backend
- test_read_zarr_v3_multi_resolution: Multi-resolution v3 zarr support
- Added ExpD_chicken_embryo_MIP.ome.zarr (v3) to test dataset

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
@sameeul sameeul merged commit e26418e into PolusAI:master Feb 17, 2026
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