Refactoring for fun, don't merge!#1105
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…iewmodels and split gui.py
…M components directly into views
…rors, and format with ruff
Move all guiWin methods verbatim into cellacdc/mixins with class names without the Mixin suffix, keep only __init__ and run in gui.py, and add gui_decorators for shared decorators. Remove mixins_bak trial code. Co-authored-by: Cursor <cursoragent@cursor.com>
Relocate WhitelistGUIElements and combine channel classes from whitelist.py and gui_combine.py into mixins/ as WhitelistGui, CombineGui, and CombineWorker. Restore gui module path constants needed by _main.py. Co-authored-by: Cursor <cursoragent@cursor.com>
Express mixin dependencies as a layered parent map so each class inherits its upstream mixins, trim guiWin to 21 root bases, and add tooling to maintain the graph without invalid MRO or import cycles. Co-authored-by: Cursor <cursoragent@cursor.com>
Introduce basic, visualization, and segmentation entry points with curated mixin bundles, optional action wiring for slim windows, and mixin import fixes so each variant starts cleanly. Co-authored-by: Cursor <cursoragent@cursor.com>
…lows." This reverts commit a9e52f5.
Split widgets.py into focused component modules while keeping widgets.py and _base_widgets.py as compatibility re-exports. Co-authored-by: Cursor <cursoragent@cursor.com>
…uns. Model CLI/GUI pipelines as composable state graphs and wire kernels, workers, and batch orchestration through them to decouple pipeline flow from imperative kernel logic. Co-authored-by: Cursor <cursoragent@cursor.com>
Move myutils, workers, widgets, and apps into focused subpackages so each module has a single responsibility while preserving existing import paths for callers. Co-authored-by: Cursor <cursoragent@cursor.com>
Clarify module boundaries: utils holds shared helpers, tools holds Utilities-menu batch workflows. Co-authored-by: Cursor <cursoragent@cursor.com>
Break up the remaining widget god modules by rendering role while keeping widgets.* imports working through the package barrel. Co-authored-by: Cursor <cursoragent@cursor.com>
Expose Viewer, run, and get_qapp so scripts can open Segmentation and Tracking mode directly without the mainWin launcher. Co-authored-by: Cursor <cursoragent@cursor.com>
Decouple data construction from the GUI so notebooks can pass in-memory arrays or filesystem paths through Viewer and imshow without viewer.open(). Co-authored-by: Cursor <cursoragent@cursor.com>
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