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Fix: CUDA OOM issue after training before inference #96

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Fix: CUDA OOM issue after training before inference #96

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8 changes: 8 additions & 0 deletions cell_segmentation/run_cpp_net.py
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Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,8 @@
import inspect
import os
import sys
import torch
import gc

currentdir = os.path.dirname(os.path.abspath(inspect.getfile(inspect.currentframe())))
parentdir = os.path.dirname(currentdir)
Expand Down Expand Up @@ -36,6 +38,9 @@
default_conf=configuration, checkpoint=configuration["checkpoint"]
)
outdir = experiment.run_experiment()
del experiment
gc.collect()
torch.cuda.empty_cache()
inference = InferenceCellViTCPP(
run_dir=outdir,
gpu=configuration["gpu"],
Expand Down Expand Up @@ -76,6 +81,9 @@
else:
# casual run
outdir = experiment.run_experiment()
del experiment
gc.collect()
torch.cuda.empty_cache()
inference = InferenceCellViTCPP(
run_dir=outdir,
gpu=configuration["gpu"],
Expand Down