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Van Andel Research Institute

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s3vs s3vs Public

Demo viewer for Aperio SVS images from Amazon S3

JavaScript 14 6
slinky slinky Public

Putting the fun into LINCS analysis

R 7 2
lambdaR lambdaR Public

Bringing R as runtime to AWS Lambda

6
intent intent Public

reformat inDrop fastqs so they look like 10X genomics fastqs

C++ 5
bifurcatoR bifurcatoR Public

bifurcatoR package

R 5 7
pbsPretty pbsPretty Public

colorful, descriptive alternives to pbsnodes and qstat

Perl 3 1

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Showing 10 of 83 repositories

SignalFinder-Extension Public
The SignalFinder Qupath extension implements the segment and fit SignalFinder algorithm in Qupath using cell measurements instead of a sliding window analysis. This results in a vastly faster and more reliable analysis.

VanAndelInstitute/SignalFinder-Extension’s past year of commit activity

0 0 0 0 Updated Feb 13, 2026
VAIDocker Public
RHEL derivative containers for user admin on compute nodes

VanAndelInstitute/VAIDocker’s past year of commit activity

Shell 3 GPL-2.0 0 2 0 Updated Feb 12, 2026
oodRstudio Public Forked from stanford-rc/sh_ood-apps
Open OnDemand apps, rstudio

VanAndelInstitute/oodRstudio’s past year of commit activity

HTML 0 GPL-3.0 14 0 0 Updated Feb 5, 2026
bifurcatoR Public
bifurcatoR package

VanAndelInstitute/bifurcatoR’s past year of commit activity

R 5 GPL-2.0 7 0 0 Updated Nov 26, 2025
InSpec_Profiles Public
Chef InSpec profiles for reusable tests against compliance baselines.

VanAndelInstitute/InSpec_Profiles’s past year of commit activity

Ruby 0 0 0 0 Updated Oct 14, 2025
influxdb_storage Public
ingest storage data into influx

VanAndelInstitute/influxdb_storage’s past year of commit activity

Python 0 0 0 0 Updated Aug 21, 2025
slurmpretty Public
slurmPretty

VanAndelInstitute/slurmpretty’s past year of commit activity

Perl 0 1 0 0 Updated Aug 20, 2025
aws-restore Public
awsRestore is a python script that runs on the command line for restoring entire folders and subfolders stored in AWS Glacier Deep Archive.

VanAndelInstitute/aws-restore’s past year of commit activity

Python 1 0 0 0 Updated Jun 6, 2025
genomicsCoreFileMgmt Public
tools to manage the VAI genomics core file lifecycle

VanAndelInstitute/genomicsCoreFileMgmt’s past year of commit activity

Perl 1 0 0 0 Updated May 28, 2025
reduced-host-information Public
Reducing the amount of values produced from the original host-information.py file. This repository is being made to separate having a simpler output from a full output

VanAndelInstitute/reduced-host-information’s past year of commit activity

Python 0 0 0 0 Updated Apr 22, 2025

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