feat: add 6 biomedical domain adapters to verification engine#44
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VibeCodingScientist merged 1 commit intomainfrom Feb 17, 2026
Merged
feat: add 6 biomedical domain adapters to verification engine#44VibeCodingScientist merged 1 commit intomainfrom
VibeCodingScientist merged 1 commit intomainfrom
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Expands verification coverage from 7 to 13 domains with 5 new adapters (genomics, epidemiology, systems_biology, immunoinformatics, metabolomics) and 2 new claim types on the existing compbio adapter (rna_structure, structure_comparison). All new adapters are API-based (no Docker). New adapters use public APIs: ClinVar, Ensembl VEP, GWAS Catalog, WHO GHO, Reactome, STRING DB, KEGG, IEDB, HMDB, PubChem, MassBank, RCSB PDB, Rfam. Optional deps (lifelines, networkx) degrade gracefully. Supporting changes: - dispatcher: register 5 new adapters - verification_queue: add 5 DOMAIN_WEIGHTS entries - task_payloads: add 5 payload models + extend CompBioPayload - models.py: expand ck_forum_domain CHECK (6 → 13 domains) - migration 012: ALTER CHECK constraint - discovery.py: document new domains + payload fields in skill.md Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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Summary
rna_structure,structure_comparisonlifelines,networkx) degrade gracefully to score=0.5Backward compatibility
DOCKER_DOMAINSset unchanged — new adapters are all API-basedDOMAIN_WEIGHTSvalues untouchedck_forum_domainis strict superset of old constraintTest plan
alembic upgrade headsucceeds on serverGET /api/labs/{slug}/discovery/skill.mddocuments new domains🤖 Generated with Claude Code