Add resumable checkpoints for VPS pipeline#26
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VibeCodingScientist merged 1 commit intomainfrom Feb 28, 2026
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Phase-level checkpoints in pride_corpus.py (PRIDE/OpenAlex phases), incremental DOI-based claim saves in extract.py, and step-level .ckpt_step_N files in run_vps.sh with --fresh flag to start clean. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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Summary
.ckpt_projects.json,.ckpt_neighbours.json) sobuild_deposit_first_corpus()can resume after PRIDE/OpenAlex phases.partial.jsonlsidecar — skips already-processed papers on resume.ckpt_step_Ntouch-files for steps 3-6,--freshflag to clean all checkpointsTest plan
nohup bash run_vps.sh &> run_vps.log &🤖 Generated with Claude Code