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Sam files misnamed in v2.3

Status: Open.

#78 In Weeks-UNC/shapemapper2;

· scottallen877 opened on Jun 17, 2026

v2.3.1 install error - Failed to import the site module

Status: Open.

#76 In Weeks-UNC/shapemapper2;

· edr-choi opened on Apr 8, 2026

ERROR with MutationParser

Status: Open.

#75 In Weeks-UNC/shapemapper2;

· bithorax1 opened on Oct 9, 2025

--star-aligner fails with Segmentation Fault during StarIndexBuilder on WSL2

Status: Open.

#73 In Weeks-UNC/shapemapper2;

· CD656 opened on Aug 28, 2025

overuse of Python2 quoting

Status: Open.

#70 In Weeks-UNC/shapemapper2;

· fizwit opened on May 21, 2025

Compile from source fails with boot error

Status: Open.

#68 In Weeks-UNC/shapemapper2;

· fizwit opened on May 21, 2025

ShapeMapper QC Fail

Status: Open.

#66 In Weeks-UNC/shapemapper2;

· camdenbair opened on Mar 10, 2025

Profile PDF mutation rate axes extend to extremes - difficult to interpret.

Status: Open.

Feature

#64 In Weeks-UNC/shapemapper2;

· jwaldern opened on Mar 5, 2025

Unsupported Operand Error

Status: Open.

#63 In Weeks-UNC/shapemapper2;

· jainronit opened on Feb 9, 2025

Error: Unable to determine variant sequence. Conflicting (overlapping) variant sequences present.

Status: Open.

#62 In Weeks-UNC/shapemapper2;

· sidsrivastava001 opened on Jan 23, 2025

--pernt-norm-factor-threshold for short RNAs and --dms option

Status: Open.

#61 In Weeks-UNC/shapemapper2;

· irinatu opened on Jan 22, 2025

Maximum Recursion Depth Exceeded Issue

Status: Open.

#60 In Weeks-UNC/shapemapper2;

· jainronit opened on Dec 28, 2024