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Adds Atlas 2 results to the leaderboard in the README #8

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Adds Atlas 2 results to the leaderboard in the README #8

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5ca565b
Added Atlas 2 results
jonasd4 Mar 20, 2026
06aaecf
added clarification about results
jonasd4 Mar 20, 2026
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45 changes: 23 additions & 22 deletions README.md
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Expand Up @@ -18,28 +18,29 @@ PathoROB contains **four datasets** covering 28 biological classes from 34 medic

| Rank | Foundation Model | TCGA 2x2 | Camelyon | Tolkach ESCA | Average (↓) |
|------|:------------------------|---------:|---------:|-------------:|------------:|
| 1 | Virchow2 | 0.822 | 0.806 | 0.955 | 0.861 |
| 2 | CONCHv1.5 | 0.832 | 0.774 | 0.951 | 0.852 |
| 3 | Atlas | 0.826 | 0.785 | 0.938 | 0.850 |
| 4 | Virchow | 0.761 | 0.751 | 0.932 | 0.815 |
| 5 | H0-mini | 0.794 | 0.718 | 0.932 | 0.815 |
| 6 | Conch | 0.824 | 0.662 | 0.951 | 0.812 |
| 7 | H-optimus-0 | 0.812 | 0.705 | 0.918 | 0.812 |
| 8 | UNI2-h | 0.803 | 0.544 | 0.923 | 0.757 |
| 9 | MUSK | 0.727 | 0.467 | 0.928 | 0.707 |
| 10 | HIPT | 0.614 | 0.649 | 0.726 | 0.663 |
| 11 | Prov-GigaPath | 0.738 | 0.399 | 0.754 | 0.630 |
| 12 | Kaiko ViT-B/8 | 0.763 | 0.147 | 0.896 | 0.602 |
| 13 | UNI | 0.747 | 0.145 | 0.902 | 0.598 |
| 14 | RETCCL | 0.593 | 0.318 | 0.878 | 0.596 |
| 15 | CTransPath | 0.652 | 0.106 | 0.872 | 0.543 |
| 16 | Kang-DINO | 0.661 | 0.043 | 0.832 | 0.512 |
| 17 | RudolfV | 0.587 | 0.184 | 0.695 | 0.489 |
| 18 | Phikon | 0.623 | 0.011 | 0.795 | 0.476 |
| 19 | Phikon-v2 | 0.619 | 0.019 | 0.768 | 0.469 |
| 20 | Ciga | 0.511 | 0.135 | 0.693 | 0.446 |

All results were computed as part of our benchmarking study. For details as well as for the APD and clustering score results, please check our [preprint](https://arxiv.org/abs/2507.17845).
| 1 | Atlas 2 | 0.879 | 0.940 | 0.964 | 0.928 |
| 2 | Virchow2 | 0.822 | 0.806 | 0.955 | 0.861 |
| 3 | CONCHv1.5 | 0.832 | 0.774 | 0.951 | 0.852 |
| 4 | Atlas | 0.826 | 0.785 | 0.938 | 0.850 |
| 5 | Virchow | 0.761 | 0.751 | 0.932 | 0.815 |
| 6 | H0-mini | 0.794 | 0.718 | 0.932 | 0.815 |
| 7 | Conch | 0.824 | 0.662 | 0.951 | 0.812 |
| 8 | H-optimus-0 | 0.812 | 0.705 | 0.918 | 0.812 |
| 9 | UNI2-h | 0.803 | 0.544 | 0.923 | 0.757 |
| 10 | MUSK | 0.727 | 0.467 | 0.928 | 0.707 |
| 11 | HIPT | 0.614 | 0.649 | 0.726 | 0.663 |
| 12 | Prov-GigaPath | 0.738 | 0.399 | 0.754 | 0.630 |
| 13 | Kaiko ViT-B/8 | 0.763 | 0.147 | 0.896 | 0.602 |
| 14 | UNI | 0.747 | 0.145 | 0.902 | 0.598 |
| 15 | RETCCL | 0.593 | 0.318 | 0.878 | 0.596 |
| 16 | CTransPath | 0.652 | 0.106 | 0.872 | 0.543 |
| 17 | Kang-DINO | 0.661 | 0.043 | 0.832 | 0.512 |
| 18 | RudolfV | 0.587 | 0.184 | 0.695 | 0.489 |
| 19 | Phikon | 0.623 | 0.011 | 0.795 | 0.476 |
| 20 | Phikon-v2 | 0.619 | 0.019 | 0.768 | 0.469 |
| 21 | Ciga | 0.511 | 0.135 | 0.693 | 0.446 |

All results were computed as part of our benchmarking study except for [Atlas 2](https://arxiv.org/pdf/2601.05148) where results were taken from the paper. For details as well as for the APD and clustering score results, please check our [preprint](https://arxiv.org/abs/2507.17845).

> [!Note]
> If you want your model to be added, please [contact](#contact) us.
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