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11 changes: 4 additions & 7 deletions docs/tutorials.md
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BrainSTEM provides comprehensive tutorials to help users get started and make the most of the platform's features. These step-by-step guides cover everything from basic setup to advanced functionality.

- [**Get started!**]({{site.baseurl}}/tutorials/get_started): A beginner's guide to help new users create accounts, join groups, and create their first project and experiments in BrainSTEM.
- [**Setting Up Lab Infrastructure**]({{site.baseurl}}/tutorials/setting-up-lab-infrastructure): Comprehensive guide to establishing your lab's foundational elements: setups, equipment, inventories, and consumable stocks.
- [**Manage Groups**]({{site.baseurl}}/tutorials/managing-groups): Detailed instructions for creating and managing research groups, including setting permissions and organizing team members.
- [**Manage Projects**]({{site.baseurl}}/tutorials/managing-projects): Guidelines for creating and organizing research projects, including best practices for data organization and collaboration.
- [**Managing Data Storage**]({{site.baseurl}}/tutorials/managing-data-storage): Comprehensive guide to setting up data storage locations, linking them to sessions, and enabling dynamic data access for analysis workflows.
- [**Share data publicly**]({{site.baseurl}}/tutorials/sharing-project-publicly): Learn how to make your research data publicly available and accessible through BrainSTEM's public sharing features.
- [**Setting Up Lab Infrastructure**]({{site.baseurl}}/tutorials/setting-up-lab-infrastructure): Comprehensive guide to establishing your lab's foundational elements: setups, equipment, inventories, and consumable stocks.
- [**Behavioral Paradigms**]({{site.baseurl}}/tutorials/behavioral-paradigms): Complete guide to creating and managing behavioral paradigms for experiments, including environment types, stimulus presentations, and reward systems.
- [**Electrophysiology Workflow**]({{site.baseurl}}/tutorials/electrophysiology-workflow): Example experimental workflow for electrophysiology studies, from project setup and probe implantation to data collection and spatial analysis.
- [**Two-Photon Imaging Workflow**]({{site.baseurl}}/tutorials/two-photon-imaging-workflow): Example workflow for two-photon calcium imaging experiments, covering viral injections, surgical procedures, imaging sessions, and visual stimulus analysis.
- [**Matlab API tool**]({{site.baseurl}}/api-tools/matlab-api-tool): Documentation for using BrainSTEM's Matlab API tools to programmatically access and manage your research data.
- [**Python API tool**]({{site.baseurl}}/api-tools/python-api-tool): Guide to utilizing BrainSTEM's Python API interface for automated data management and analysis.
- [**Managing Data Storage**]({{site.baseurl}}/tutorials/managing-data-storage): Comprehensive guide to setting up data storage locations, linking them to sessions, and enabling dynamic data access for analysis workflows.
- [**Submit Resources & Taxonomies**]({{site.baseurl}}/tutorials/submit-resource-and-taxonomies): Instructions for contributing to BrainSTEM's shared resources and taxonomies to enhance the platform's capabilities.
- [**Electrophysiology Workflow**]({{site.baseurl}}/tutorials/electrophysiology-workflow): Example experimental workflow for electrophysiology studies, from project setup and probe implantation to data collection and spatial analysis.
- [**Share data publicly**]({{site.baseurl}}/tutorials/sharing-project-publicly): Learn how to make your research data publicly available and accessible through BrainSTEM's public sharing features.
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