Skip to content

Add toggle for db_load_mode#5

Open
roodai wants to merge 1 commit into
mainfrom
toggle_db_load
Open

Add toggle for db_load_mode#5
roodai wants to merge 1 commit into
mainfrom
toggle_db_load

Conversation

@roodai

@roodai roodai commented Jun 11, 2026

Copy link
Copy Markdown
Collaborator

Adds a mmseqs_db_load_mode param to toggle MMseqs2's db-load-mode from nextflow.config. The toggle lets you use db-load-mode 2 (mmap), as in ColabFold's defaults, to keep the index in page cache instead of re-reading it from disk each stage.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant