Skip to content

Derek furst/error message #899

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
yuanzhou merged 3 commits into from
Aug 21, 2025
Merged

Derek furst/error message #899

Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
8414683
Merge pull request #894 from hubmapconsortium/yuanzhou/mitigate-504
yuanzhou Aug 11, 2025
8cbaecf
Merge pull request #893 from hubmapconsortium/shirey/exclude-data-path
yuanzhou Aug 11, 2025
604a560
added error_message field to upload. changed error_message in dataset…
DerekFurstPitt Aug 20, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 6 additions & 1 deletion src/schema/provenance_schema.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -328,6 +328,7 @@ ENTITIES:
- slide_id
- tissue_id
- parent_sample_id
- data_path
- direct_ancestors:
# Sample ancestors of a Dataset must have these fields removed
- lab_tissue_sample_id
Expand Down Expand Up @@ -387,7 +388,7 @@ ENTITIES:
description: "True if the data contains any human genetic sequence information."
error_message:
type: string
indexed: true
indexed: false
description: "An open text field that holds the last error message that arose from pipeline validation or analysis."
status:
type: string
Expand Down Expand Up @@ -1341,6 +1342,10 @@ ENTITIES:
- validate_priority_project
before_property_create_validators:
- validate_priority_project
error_message:
type: string
indexed: false
description: "An open text field that holds the last error message that arose from pipeline validation or analysis."

############################################# EPICollection #############################################
Epicollection:
Expand Down