mushroom_hyperscanning

Preprocessing code for the hyperscanning data acquired in Mexico during mushroom ceremonies

Installation

1. Clone the repository and cd into it:

   git clone git@github.com:hyruuk/mushroom_hyperscanning.git
   cd mushroom_hyperscanning
   

2. Install the mushroom hyperscanning package:

   pip install -e .
   

3. Install ffmpeg for audio file manipulation:
   Windows:

   winget install ffmpeg
   

   Linux:

   sudo apt-get install ffmpeg
   

Run preprocessing pipeline

To run the preprocessing pipeline, and create the deriv-00x-* directories with derivative data, run this command:

python mushroom_hyperscanning/scripts/preprocess.py

Use the --overwrite flag to overwrite existing derivatives.

Loading EEG data

Load raw EEG data using the load_eeg function and specifying

from mushroom_hyperscanning.data import load_eeg

raw = load_eeg(subject="01", ceremony="ceremony1", root="path/to/derivative-directory")