I use R to manipulate the data and produce the charts. I use data.table, ggplot2 and scales for this analysis. To download these packages, open R console and enter the following:
pkgs <- c("data.table", "scales", "ggplot2")
for(i in seq_along(pkgs){
if(!nzchar(system.file(package = "pkgs[[i]]))) install.packages(pkgs[[i]])
}The data/process_data.R file reads the raw data and manipulate it to use in analysis/analysis.R. So the script flow is data/process_data.R --> analysis/analysis.R, pretty simple!
FluView: https://gis.cdc.gov/grasp/fluview/fluportaldashboard.html. Go on "Download Data" --> "Custom download". Years of 2015-2020 for CA, NY, TX, WA.