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Changed the regex for locus and region. It was too restrictive. Hope … #8

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Changed the regex for locus and region. It was too restrictive. Hope … #8

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4 changes: 2 additions & 2 deletions igv_plotter/igv_api.py
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Original file line number Diff line number Diff line change
Expand Up @@ -270,12 +270,12 @@ def _get_track_name(self, filename):
def _match_locus_string(self, locus_str):
"""If this is a valid locus_str (eg. 'chrX:1000'), return a reg-exp Match object where match.group(1) is the
chromosome and match.group(2) is the position. Otherwise, return None"""
return re.match("([a-zA-Z0-9]{1,5}):([0-9]{1,10})", locus_str)
return re.match("([^:]+):([0-9]+)", locus_str)

def _match_region_string(self, region_str):
"""If region_str is valid (eg. 'chrX:10-100'), return a reg-exp Match object where match.group(1) is the
chromosome and match.group(2) and match.group(3) are the start and stop positions. Otherwise, return None."""
return re.match("([a-zA-Z0-9]{1,5}):([0-9]{1,10})-([0-9]{1,10})", region_str)
return re.match("([^:]+):([0-9]+)-([0-9]+)", region_str)

def _get_command_queue(self):
"""Used for testing"""
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