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Update flow rate and values in gradient data#239

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f-kretschmer merged 4 commits into
michaelwitting:masterfrom
albertogilf:patch-2
May 11, 2026
Merged

Update flow rate and values in gradient data#239
f-kretschmer merged 4 commits into
michaelwitting:masterfrom
albertogilf:patch-2

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@albertogilf
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According to the manuscript https://www.mdpi.com/2218-1989/9/5/85

The gradient data is this one :)

albertogilf and others added 2 commits May 6, 2026 18:31
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github-actions Bot commented May 6, 2026

Preprocessing Report

0428

mode raw SMILES standardized SMILES Classyfire classifications descriptors
canonical 0 180 180 180
isomeric 180 180 176 180
nr
entries without rt 0
entries without SMILES 0
entries flagged by QSPR-based validation 4
entry-pairs flagged by retention order-based validation (datasets with identical setups) 0
entry-pairs flagged by retention order-based validation (systematic measurements) 0

Files successfully generated

✔️ RTdata canonical
✔️ RTdata isomeric
✔️ descriptors canonical
✔️ descriptors isomeric
✔️ metadata file
✔️ gradient file
✔️ report canonical
✔️ report isomeric

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github-actions Bot commented May 6, 2026

This Pull Request is in "draft" status. When all issues (if any) are addressed, the status can manually be set to "ready for review". Subsequently, the temporary dataset IDs will be replaced with the final ones; then the Pull Request can be merged.

@albertogilf albertogilf closed this May 8, 2026
@albertogilf albertogilf deleted the patch-2 branch May 8, 2026 08:27
@albertogilf albertogilf restored the patch-2 branch May 8, 2026 08:30
The gradient data has been obtained from section 4.1.3 here https://www.mdpi.com/2218-1989/9/5/85. The flow rate was obtained directly from the submitters (Víctor González Ruiz)
@albertogilf albertogilf reopened this May 8, 2026
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The flow rate has been modified to 0.3 after asking one of the authors. The gradient for study 428 is:
t [min] flow rate [ml/min] A [%] B [%]
0 0.3 98 2
14 0.3 0 100
17 0.3 0 100
17 0.3 98 2
25 0.3 98 2

The rest of the changes are from the preprocessing processes of repoRT!

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github-actions Bot commented May 8, 2026

Preprocessing Report

0428

mode raw SMILES standardized SMILES Classyfire classifications descriptors
canonical 0 180 180 180
isomeric 180 180 176 180
nr
entries without rt 0
entries without SMILES 0
entries flagged by QSPR-based validation 3
entry-pairs flagged by retention order-based validation (datasets with identical setups) 0
entry-pairs flagged by retention order-based validation (systematic measurements) 0

Files successfully generated

✔️ RTdata canonical
✔️ RTdata isomeric
✔️ descriptors canonical
✔️ descriptors isomeric
✔️ metadata file
✔️ gradient file
✔️ report canonical
✔️ report isomeric

@github-actions
Copy link
Copy Markdown

github-actions Bot commented May 8, 2026

This Pull Request is in "draft" status. When all issues (if any) are addressed, the status can manually be set to "ready for review". Subsequently, the temporary dataset IDs will be replaced with the final ones; then the Pull Request can be merged.

@f-kretschmer f-kretschmer merged commit 06e3c20 into michaelwitting:master May 11, 2026
f-kretschmer added a commit that referenced this pull request May 11, 2026
gradient and flowrate update, from #239
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3 participants