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83e7f9b
dinamical hoc object generation, restructuring
sasaray May 30, 2018
d83e024
load_neuron
sasaray May 30, 2018
8f834cd
PYGMO DE
tmpoe May 30, 2018
59b64bd
user fun works
sasaray May 30, 2018
7a6f8c9
pygmo
mohacsimate May 30, 2018
d678364
pygmo
mohacsimate May 30, 2018
af0bac0
Pygmo algos are now handled correctly (html, figs etc) and pygmo PSO …
tmpoe May 30, 2018
881a054
Initial pretty pygmo hoc non-pickling
tmpoe Jun 6, 2018
5035deb
Pygmo island algos
tmpoe Sep 29, 2018
17e1090
The simplified model seems to be working with pygmo now. The solution…
tmpoe Oct 9, 2018
1573cd9
Added force boundary to XNES and CMAES
tmpoe Oct 16, 2018
fb1aa00
Simplified and IF models now work. Problem with simplified was the lo…
tmpoe Oct 16, 2018
52c6321
Updated stimulation file.
tmpoe Oct 16, 2018
8173870
Everything commited
tmpoe Oct 31, 2018
a63cf09
Added FullGrid to this version and additionally cleaned it up a littl…
tmpoe Nov 5, 2018
64fd8c3
Multiprocessing external
tmpoe Nov 7, 2018
45d213f
Hardcoded integrate and fire wit error handling.
tmpoe Nov 7, 2018
c7e127a
Unique ID for external handler
tmpoe Nov 7, 2018
988ba20
Deleted unnecessary files and directories.
tmpoe Nov 7, 2018
69da12a
Updated test files
tmpoe Nov 7, 2018
c92aadb
Removed unnecesarray comments and prints. Added directory to baseOpti…
tmpoe Nov 12, 2018
d4b94c9
Merge branch 'pygmo_python3' of https://github.com/tmpITK/optimizer i…
tmpoe Nov 12, 2018
7168d93
Corrected xml file path and started working on deap.
tmpoe Nov 14, 2018
de830a9
Deleted stim.p and estim.p files.
tmpoe Nov 14, 2018
3e6af25
deap algos now normalize parameters.
tmpoe Nov 14, 2018
9f9083d
Deleted comments and prints.
tmpoe Nov 14, 2018
a2e0144
Optimizer can handle IBEA output and IBEA seems to be working
tmpoe Nov 14, 2018
74da054
Recommiting lost progress (?)
tmpoe Jan 5, 2019
e62c8e1
Sheer void
tmpoe Jan 5, 2019
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3 changes: 2 additions & 1 deletion .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -3,4 +3,5 @@ build/*
.#*
*.log
*.param
*~
*~
*.py.bak
47 changes: 0 additions & 47 deletions compare/Genesis/VClamp_surrogate/Makefile

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38 changes: 0 additions & 38 deletions compare/Genesis/VClamp_surrogate/SA_run

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31 changes: 0 additions & 31 deletions compare/Genesis/VClamp_surrogate/SAdemo2.g

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24 changes: 0 additions & 24 deletions compare/Genesis/VClamp_surrogate/SAorig.g

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16 changes: 0 additions & 16 deletions compare/Genesis/VClamp_surrogate/best.params

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20 changes: 0 additions & 20 deletions compare/Genesis/VClamp_surrogate/cell.p

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61 changes: 0 additions & 61 deletions compare/Genesis/VClamp_surrogate/cell2.g

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75 changes: 0 additions & 75 deletions compare/Genesis/VClamp_surrogate/cell3.g

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