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@molgenis

MOLGENIS - open source solutions for scientific data

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  1. molgenis-emx2 molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    Vue 25 22

  2. molgenis-service-armadillo molgenis-service-armadillo Public

    Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

    Java 9 11

  3. systemsgenetics systemsgenetics Public

    Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

    Java 179 99

  4. vip vip Public

    Variant Interpretation Pipeline

    Shell 48 9

  5. molgenis molgenis Public

    MOLGENIS - for scientific data: management, exploration, integration and analysis.

    Java 121 96

Repositories

Showing 10 of 205 repositories
  • molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    molgenis/molgenis-emx2’s past year of commit activity
    Vue 25 LGPL-3.0 22 279 (3 issues need help) 78 Updated Mar 16, 2026
  • molgenis.org Public

    Source code of the (new) website for MOLGENIS

    molgenis/molgenis.org’s past year of commit activity
    CSS 1 LGPL-3.0 22 4 1 Updated Mar 16, 2026
  • molgenis-service-armadillo Public

    Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

    molgenis/molgenis-service-armadillo’s past year of commit activity
    Java 9 LGPL-3.0 11 74 (1 issue needs help) 18 Updated Mar 16, 2026
  • vip-inheritance Public
    molgenis/vip-inheritance’s past year of commit activity
    Java 1 LGPL-3.0 0 0 0 Updated Mar 16, 2026
  • vip-decision-tree Public

    Decision tree module for the Variant Interpretation Pipeline (vip)

    molgenis/vip-decision-tree’s past year of commit activity
    Java 3 LGPL-3.0 0 0 6 Updated Mar 16, 2026
  • vip-report Public

    Report generator for Variant Call Format (VCF) files

    molgenis/vip-report’s past year of commit activity
    HTML 5 LGPL-3.0 1 0 1 Updated Mar 16, 2026
  • molgenis-r-datashield Public

    Armadillo implementation of DSI to be DataSHIELD ready, part of the MOLGENIS suite

    molgenis/molgenis-r-datashield’s past year of commit activity
    R 0 5 1 0 Updated Mar 16, 2026
  • variable-taxon-mapper Public

    A tool for mapping elements to a (biomedical) taxonomy

    molgenis/variable-taxon-mapper’s past year of commit activity
    Python 0 LGPL-3.0 1 0 0 Updated Mar 16, 2026
  • vip Public

    Variant Interpretation Pipeline

    molgenis/vip’s past year of commit activity
    Shell 48 LGPL-3.0 9 5 11 Updated Mar 16, 2026
  • Trendanalysis Public

    Generate Trendanalysis plots for standard diagnostic techniques.

    molgenis/Trendanalysis’s past year of commit activity
    Shell 0 4 1 0 Updated Mar 13, 2026
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