Release of ProtGraph Version 0.3.12

This release updates dependencies so that ProtGraph can be run with the python version 3.9 up to 3.14

• Fixed error in convert fasta to sp embl
• Rebased on ProtGraph main branch
• Extended SP-EMBL Generator to also include other features. This also contains a small description with examples. This can be used to design custom SP-EMBL Entries with custom annotation (e.g. from sequences proteins and its variants, keyword: proteogenomics.)
• GitHub Actions Update

Release of ProtGraph 0.3.11

• Minor fix, where ProtGraph was not able to extract the feature information (Bug)

This release only fixes a minor error. Nothing new.

Release of ProtGraph 0.3.10

ProtGraph has now some more functionalities. Check out the PR #69 for more information!

Release of ProtGraph v0.3.9

Fixed the dependency-nightmare. No more need for a biopython-development version. In this release we also removed Pipfile and changed to a requirements.txt. A FASTA-Parser is now included, which can generated SP-EMBL-txt entries (optionally with annotated VARIANTs if needed). This FASTA-Parser is in a very early version and will be expanded to also encode other features.
A poster and a presentation was also added in materials_and_posters.

Release of ProtGraph v0.3.8

Version Bump to v0.3.8

Release of ProtGraph v0.3.7

There was a bug for exporting peptides, which now should be fixed. The typos in the README were corrected.

Release of ProtGraph v0.3.6

Added Chain-Feature-Parsing. Also included zenodo into the README.md

Release of ProtGraph v0.3.5

Release of ProtGraph 0.3.5. Test are working locally.

• Fixed error while Collapsing Edges
• Updated README.md
• Added materials and posters

Release of ProtGraph v0.3.4

Finished the Implementation of N-Term and C-Term variable and fixed Modifications. Now ProtGraph can encode all mods, but only 1 (fixed/variable) modification per aminoacid (including N-Term and C-Term).

Release of ProtGraph v0.3.3

Release after v0.3.2, which had a BUG in statistics generation.