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chore: preliminary CL upload - giab-NA12878-agilent-75M #70

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chore: preliminary CL upload - giab-NA12878-agilent-75M #70

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15 changes: 15 additions & 0 deletions config/config.yaml
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Expand Up @@ -762,6 +762,21 @@ variant-calls:
filename: A006850052_NA12878_200M_BWA_DV_STANDART.vcf
benchmark: giab-NA12878-agilent-200M
rename-contigs: true
strelka_default-75M-agilent:
labels:
site: CL
pipeline: strelka-default
trimming: FastP v0.23.4
read-mapping: BWA_MEM docker-pcapcore_5.6.1
variant-detection: strelka2 v2.9.10
genotyping: none
reads: 75M
subcategory: NA12878-agilent
zenodo:
deposition: 21399917
filename: BWA_STRELKA_PASS.vcf.gz
benchmark: giab-NA12878-agilent-75M
rename-contigs: resources/rename-contigs/ucsc-to-ensembl.txt
custom-benchmarks:
giab-NA12878-agilent-200M:
zenodo:
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