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    9 repositories

    • TissUUmaps4

      Public
      A GPU-accelerated web application for visualization, annotation and sharing of spatial biology data
      TypeScript
      •
      MIT License
      •0•4•1•1•Updated Jan 6, 2026Jan 6, 2026

    • TissUUmaps.github.io

      Public
      TissUUmaps website
      HTML
      •
      MIT License
      •1•0•0•0•Updated Dec 6, 2025Dec 6, 2025

    • TissUUmaps

      Public
      TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.
      JavaScript
      •
      MIT License
      •13•66•25•2•Updated Dec 2, 2025Dec 2, 2025

    • OMEZarrTileSource

      Public
      An OpenSeadragon tile source for the OME-Zarr bioimage file format
      TypeScript
      •
      MIT License
      •0•10•1•0•Updated Nov 25, 2025Nov 25, 2025

    • TissUUmaps-docs

      Public
      Documentation for TissUUmaps
      Python
      •2•1•0•0•Updated Nov 19, 2025Nov 19, 2025

    • TissUUmaps-schema

      Public
      Pydantic schema for TissUUmaps
      Python
      •
      MIT License
      •0•0•0•1•Updated Aug 4, 2025Aug 4, 2025

    • raw2tmap

      Public
      Convert OME-Zarr files to TMAP format
      Python
      •
      MIT License
      •0•3•0•1•Updated Aug 4, 2025Aug 4, 2025

    • TissUUmapsCore

      Public archive
      TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.
      bioinformaticsbiologygene-expressioncomputationalgene-expression-profilesdigital-pathology
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •3•24•0•0•Updated Jan 5, 2023Jan 5, 2023

    • napari-tissuumaps

      Public
      Napari plugin to add compatibility to tissuumaps
      Python
      •
      MIT License
      •1•4•0•0•Updated Aug 5, 2022Aug 5, 2022