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rochefort-lab

6 followers
University of Edinburgh, UK
https://www.ed.ac.uk/discovery-brain-sciences/our-staff/research-groups/nathalie-rochefort

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fissa fissa Public

A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.

Python 34 34

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Showing 10 of 10 repositories

fissa Public
A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.

rochefort-lab/fissa's past year of commit activity

Python 34 GPL-3.0 34 17 2 Updated Jul 13, 2026
ROI_matching Public
Semi automatic ROI matching (with GUI)

rochefort-lab/ROI_matching's past year of commit activity

MATLAB 2 MIT 0 0 0 Updated Nov 22, 2025
Padamsey-et-al-Neuron-2022 Public
Padamsey*, Katsanevaki, Dupuy and Rochefort*

rochefort-lab/Padamsey-et-al-Neuron-2022's past year of commit activity

Jupyter Notebook 0 1 0 0 Updated Sep 30, 2024
fissa-suite2p-example Public
This repository provides the notebook for the Binder environment which allows us to run Suite2p.

rochefort-lab/fissa-suite2p-example's past year of commit activity

HTML 1 GPL-3.0 0 0 1 Updated Mar 25, 2022
Francioni-et-al.-eLife-2019 Public

rochefort-lab/Francioni-et-al.-eLife-2019's past year of commit activity

MATLAB 0 MIT 2 0 0 Updated Apr 29, 2021
Henschke_et_al_CurrBiology2020 Public
Henschke*, Dylda*, Katsanevaki*, Dupuy, Currie, Amvrosiadis, Pakan* and Rochefort*. Current Biology, 2020.

rochefort-lab/Henschke_et_al_CurrBiology2020's past year of commit activity

MATLAB 0 1 0 0 Updated Apr 9, 2020
SimCalc Public
SimCalc simulates calcium imaging data, with the option for different neural shapes and locations

rochefort-lab/SimCalc's past year of commit activity

Python 1 GPL-3.0 0 0 0 Updated Jun 27, 2019
Pakanetal_CellReport2018 Public
Pakan, Currie, Fischer, Rochefort, Cell Report 2018

rochefort-lab/Pakanetal_CellReport2018's past year of commit activity

MATLAB 1 0 0 0 Updated Aug 30, 2018
sima Public Forked from losonczylab/sima
Python package for analysis of dynamic fluorescence microscopy data

rochefort-lab/sima's past year of commit activity

Python 0 GPL-2.0 55 0 0 Updated Mar 8, 2018
m2html Public
Documentation System for MATLAB in HTML

rochefort-lab/m2html's past year of commit activity

MATLAB 5 4 0 1 Updated Feb 9, 2017

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