A scRNA-seq pipelines benchmark created using OmniBenchmark.
OmniBenchmark is required to run this pipeline and can be installed following this guide.
git clone https://github.com/scrna-bench/pipelines-plan.git
cd pipelines-plan
ob run benchmark.yaml -- --apptainer-args='--nv'
If you use this benchmark in your research, please cite it using the information in CITATION.cff.
Contributions are welcome! Please feel free to submit a Pull Request.